Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Sec23ip-201ENSMUST00000042942 4505 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col6a3E9PWQ3 Gm13245-201ENSMUST00000119646 260 ntBASIC7□□□□□ -1.29
Col6a3E9PWQ3 Gm11909-201ENSMUST00000121424 759 ntBASIC7□□□□□ -1.29
Col6a3E9PWQ3 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC7□□□□□ -1.29
Col6a3E9PWQ3 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col6a3E9PWQ3 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC7□□□□□ -1.29
Col6a3E9PWQ3 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Col6a3E9PWQ3 Dclre1b-202ENSMUST00000063502 4113 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col6a3E9PWQ3 Kantr-207ENSMUST00000195280 4212 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
Col6a3E9PWQ3 Zfp354a-203ENSMUST00000109119 2078 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Col6a3E9PWQ3 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC7□□□□□ -1.29
Col6a3E9PWQ3 Gm38331-201ENSMUST00000195719 2671 ntBASIC7□□□□□ -1.29
Col6a3E9PWQ3 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
Col6a3E9PWQ3 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC7□□□□□ -1.29
Col6a3E9PWQ3 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC7□□□□□ -1.29
Col6a3E9PWQ3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col6a3E9PWQ3 Aldh7a1-208ENSMUST00000174518 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Col6a3E9PWQ3 AC159379.2-201ENSMUST00000220244 2482 ntBASIC7□□□□□ -1.29
Col6a3E9PWQ3 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Col6a3E9PWQ3 Tsc2-203ENSMUST00000226284 6266 ntAPPRIS ALT2 BASIC7□□□□□ -1.29
Col6a3E9PWQ3 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col6a3E9PWQ3 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Col6a3E9PWQ3 Gm42700-201ENSMUST00000199071 2437 ntBASIC7□□□□□ -1.29
Col6a3E9PWQ3 Gm15578-201ENSMUST00000117320 475 ntBASIC7□□□□□ -1.29
Col6a3E9PWQ3 Gm15040-201ENSMUST00000118561 1241 ntBASIC7□□□□□ -1.29
Col6a3E9PWQ3 Gm12955-201ENSMUST00000119689 957 ntBASIC7□□□□□ -1.29
Col6a3E9PWQ3 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Col6a3E9PWQ3 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC7□□□□□ -1.29
Col6a3E9PWQ3 Gm22355-201ENSMUST00000175531 96 ntBASIC7□□□□□ -1.29
Col6a3E9PWQ3 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC7□□□□□ -1.29
Col6a3E9PWQ3 Gm19065-202ENSMUST00000203910 1165 ntBASIC7□□□□□ -1.29
Col6a3E9PWQ3 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC7□□□□□ -1.29
Col6a3E9PWQ3 LOC665443-201ENSMUST00000212284 796 ntBASIC7□□□□□ -1.29
Col6a3E9PWQ3 AC154806.5-205ENSMUST00000228828 411 ntBASIC7□□□□□ -1.29
Col6a3E9PWQ3 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col6a3E9PWQ3 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col6a3E9PWQ3 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Map4k4-217ENSMUST00000195636 4082 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Pan2-201ENSMUST00000005825 4445 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Gm6368-201ENSMUST00000119727 2147 ntBASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Clip4-201ENSMUST00000024854 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Gm12193-201ENSMUST00000117250 379 ntBASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Gm24534-201ENSMUST00000157949 291 ntBASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Gm1972-201ENSMUST00000181606 964 ntBASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Gm9202-201ENSMUST00000223036 437 ntBASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Nat8f5-201ENSMUST00000032074 986 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Ube4bos1-201ENSMUST00000141259 2227 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Nos1-202ENSMUST00000102557 4591 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Gm45705-201ENSMUST00000211831 2134 ntBASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Nqo1-201ENSMUST00000003947 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Plppr1-201ENSMUST00000076670 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 AC123832.1-201ENSMUST00000214120 2371 ntBASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Hdac4-201ENSMUST00000008995 3937 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Xpnpep3-201ENSMUST00000041609 3236 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Wdr76-202ENSMUST00000099473 2315 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Gm45537-201ENSMUST00000211539 2708 ntBASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Rpa1-202ENSMUST00000092907 5077 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Eif4e2-207ENSMUST00000113235 3473 ntTSL 5 BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Gm38302-201ENSMUST00000191676 2076 ntBASIC6.99□□□□□ -1.29
Col6a3E9PWQ3 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Gys2-201ENSMUST00000032371 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Klra13-ps-201ENSMUST00000125813 802 ntBASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Gm25147-201ENSMUST00000083030 105 ntBASIC6.98□□□□□ -1.29
Col6a3E9PWQ3 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms