Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Gm37426-201ENSMUST00000195241 2470 ntBASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Gm15596-201ENSMUST00000121139 784 ntBASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Gm11263-201ENSMUST00000121853 749 ntBASIC6.14□□□□□ -1.43
Usf3B2RUQ2 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Gm25342-201ENSMUST00000157459 122 ntBASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Gm24781-201ENSMUST00000157636 117 ntBASIC6.14□□□□□ -1.43
Usf3B2RUQ2 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Gm2505-201ENSMUST00000200413 825 ntBASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Gm45485-201ENSMUST00000211229 357 ntBASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Gm7690-201ENSMUST00000190885 1399 ntBASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Fbxo7-204ENSMUST00000130320 5388 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Gm14891-201ENSMUST00000117378 596 ntBASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Gm12959-201ENSMUST00000119396 403 ntBASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Gm14826-201ENSMUST00000121284 901 ntBASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Gm6838-201ENSMUST00000172851 582 ntBASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Gm43590-201ENSMUST00000195987 387 ntBASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Gm44590-201ENSMUST00000206161 391 ntBASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Gm4247-201ENSMUST00000211441 1042 ntBASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Gm40778-201ENSMUST00000217825 1344 ntBASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 CT009711.2-202ENSMUST00000224538 973 ntBASIC6.14□□□□□ -1.43
Usf3B2RUQ2 AC154627.1-201ENSMUST00000228799 1286 ntBASIC6.14□□□□□ -1.43
Usf3B2RUQ2 AC165155.1-201ENSMUST00000228932 445 ntBASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Myo1h-201ENSMUST00000124316 2877 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Gm232-201ENSMUST00000216549 2559 ntBASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Usf3B2RUQ2 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gm9256-201ENSMUST00000198106 1420 ntBASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gm11799-201ENSMUST00000116110 460 ntBASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gm22953-201ENSMUST00000116724 101 ntBASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gm14904-201ENSMUST00000117067 335 ntBASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gm12844-201ENSMUST00000119463 582 ntBASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gm18797-201ENSMUST00000190809 1174 ntBASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gm38203-201ENSMUST00000191815 245 ntBASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC6.13□□□□□ -1.43
Usf3B2RUQ2 AC091237.1-201ENSMUST00000224911 637 ntBASIC6.13□□□□□ -1.43
Usf3B2RUQ2 AC125087.1-201ENSMUST00000227552 514 ntBASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Usf3B2RUQ2 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 178.1 ms