Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Diaph3-204ENSMUST00000226254 682 ntBASIC8.27□□□□□ -1.09
Smc1aQ9CU62 AC138604.2-201ENSMUST00000226620 921 ntBASIC8.27□□□□□ -1.09
Smc1aQ9CU62 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smc1aQ9CU62 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smc1aQ9CU62 Gm45201-201ENSMUST00000207187 2679 ntBASIC8.27□□□□□ -1.09
Smc1aQ9CU62 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Smc1aQ9CU62 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smc1aQ9CU62 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Smc1aQ9CU62 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Smc1aQ9CU62 Gm37234-201ENSMUST00000193259 1441 ntBASIC8.27□□□□□ -1.09
Smc1aQ9CU62 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Smc1aQ9CU62 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC8.27□□□□□ -1.09
Smc1aQ9CU62 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Smc1aQ9CU62 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC8.27□□□□□ -1.09
Smc1aQ9CU62 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Gm17083-201ENSMUST00000165849 1366 ntBASIC8.26□□□□□ -1.09
Smc1aQ9CU62 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Gm43769-201ENSMUST00000201871 4323 ntBASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Gm14480-201ENSMUST00000118521 433 ntBASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Gm6877-201ENSMUST00000119347 1101 ntBASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Gm23663-201ENSMUST00000158045 80 ntBASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Gm22687-201ENSMUST00000158301 105 ntBASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Gm38203-201ENSMUST00000191815 245 ntBASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Ighv1-21-201ENSMUST00000194856 351 ntBASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Gm44147-201ENSMUST00000204658 94 ntBASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Gm29759-201ENSMUST00000205860 327 ntBASIC8.26□□□□□ -1.09
Smc1aQ9CU62 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Smc1aQ9CU62 AC153561.1-201ENSMUST00000215943 469 ntBASIC8.26□□□□□ -1.09
Smc1aQ9CU62 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Gm24696-201ENSMUST00000083878 134 ntBASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Smc1aQ9CU62 Gm38244-201ENSMUST00000191737 2586 ntBASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Gm43113-201ENSMUST00000199713 1754 ntBASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Mir503-201ENSMUST00000102168 71 ntBASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Serpina3h-202ENSMUST00000116393 1226 ntBASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Mir6769b-201ENSMUST00000184793 60 ntBASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Gm28142-201ENSMUST00000186899 698 ntBASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Gm37548-201ENSMUST00000194519 3814 ntBASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Gm43203-201ENSMUST00000200130 558 ntBASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Gm7368-201ENSMUST00000213307 367 ntBASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Smc1aQ9CU62 AC154361.1-201ENSMUST00000225694 745 ntBASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Gm25926-201ENSMUST00000082899 160 ntBASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Gm24411-201ENSMUST00000083428 131 ntBASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Smc1aQ9CU62 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Smc1aQ9CU62 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC8.25□□□□□ -1.09
Smc1aQ9CU62 CT010453.1-201ENSMUST00000226795 2201 ntBASIC8.25□□□□□ -1.09
Smc1aQ9CU62 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Smc1aQ9CU62 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Olfr650-ps1-201ENSMUST00000121432 2321 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Smc1aQ9CU62 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms