Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Sec61bQ9CQS8 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Sec61bQ9CQS8 Tlr5-201ENSMUST00000110997 3199 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Sec61bQ9CQS8 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Sec61bQ9CQS8 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Sec61bQ9CQS8 Itga9-202ENSMUST00000124360 1935 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Cacng5-202ENSMUST00000106742 3678 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Evc-203ENSMUST00000114154 3695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Ppp6c-201ENSMUST00000028087 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Tm4sf1-202ENSMUST00000171384 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Pkp4-203ENSMUST00000112577 4222 ntTSL 5 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm38021-201ENSMUST00000195687 1560 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Esrrb-204ENSMUST00000116402 4300 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Rdh12-202ENSMUST00000122227 1624 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm44676-201ENSMUST00000208520 3055 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Pdik1l-202ENSMUST00000105876 4509 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 1700006J14Rik-203ENSMUST00000160091 2629 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Rnf38-204ENSMUST00000107836 1694 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Hacl1-202ENSMUST00000127204 1699 ntTSL 5 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Acsl6-206ENSMUST00000101211 3106 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm37200-201ENSMUST00000193689 2172 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Aplp2-201ENSMUST00000072634 3634 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm44445-201ENSMUST00000204075 2683 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Xpnpep2-203ENSMUST00000115000 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Clnk-201ENSMUST00000169819 1700 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Clnk-202ENSMUST00000171633 1700 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Ptpn7-201ENSMUST00000049449 3261 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Myo15b-207ENSMUST00000167507 1785 ntTSL 5 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gngt2-203ENSMUST00000107708 629 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gngt2-204ENSMUST00000107709 587 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm8818-201ENSMUST00000110797 1047 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Swi5-202ENSMUST00000113395 712 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Rhox4c-201ENSMUST00000115183 903 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm8202-201ENSMUST00000117682 310 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Tma7-ps-201ENSMUST00000118448 195 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm14238-201ENSMUST00000120227 323 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm12271-201ENSMUST00000121719 414 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm40-201ENSMUST00000122131 660 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Recql5os1-201ENSMUST00000134391 396 ntTSL 5 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm11300-201ENSMUST00000137651 565 ntTSL 5 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm14225-201ENSMUST00000142310 539 ntTSL 2 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm16329-201ENSMUST00000148174 371 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm22214-201ENSMUST00000157563 172 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm22484-201ENSMUST00000157992 306 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm22207-201ENSMUST00000158609 317 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm24734-201ENSMUST00000158860 262 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm17450-201ENSMUST00000164671 426 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm25735-201ENSMUST00000175164 215 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Mup-ps7-201ENSMUST00000178292 545 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm21809-201ENSMUST00000178495 468 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Mup-ps8-201ENSMUST00000178663 545 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Mup-ps9-201ENSMUST00000178847 545 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm17412-201ENSMUST00000179261 468 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Mup-ps6-201ENSMUST00000179564 545 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Rnu3b1-201ENSMUST00000183812 216 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Rnu3b4-201ENSMUST00000184171 215 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Rnu3b2-201ENSMUST00000185073 215 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm2693-201ENSMUST00000189119 571 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm5150-202ENSMUST00000194367 1212 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm17978-201ENSMUST00000195986 769 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm3544-201ENSMUST00000196129 305 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Rnu3b2-202ENSMUST00000196353 216 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Wars2-205ENSMUST00000198044 403 ntTSL 3 BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Rnu3b3-202ENSMUST00000198628 215 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm43717-201ENSMUST00000198684 310 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Rnu3b4-202ENSMUST00000199460 216 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Rnu3b1-202ENSMUST00000200547 215 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm42402-201ENSMUST00000208341 1054 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm44911-201ENSMUST00000208436 1062 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm18455-201ENSMUST00000208768 459 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm36371-201ENSMUST00000209043 1103 ntBASIC4.87□□□□□ -1.63
Sec61bQ9CQS8 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms