Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 AC126554.3-201ENSMUST00000223131 493 ntBASIC6.89□□□□□ -1.31
Use1Q9CQ56 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Use1Q9CQ56 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Use1Q9CQ56 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Use1Q9CQ56 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Use1Q9CQ56 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Use1Q9CQ56 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Use1Q9CQ56 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Use1Q9CQ56 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Use1Q9CQ56 AC161884.1-201ENSMUST00000225436 2174 ntBASIC6.89□□□□□ -1.31
Use1Q9CQ56 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Use1Q9CQ56 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC6.89□□□□□ -1.31
Use1Q9CQ56 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Use1Q9CQ56 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Use1Q9CQ56 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Use1Q9CQ56 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.89□□□□□ -1.31
Use1Q9CQ56 Gm43022-201ENSMUST00000197067 4268 ntBASIC6.89□□□□□ -1.31
Use1Q9CQ56 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Use1Q9CQ56 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm37078-201ENSMUST00000193314 2009 ntBASIC6.88□□□□□ -1.31
Use1Q9CQ56 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Use1Q9CQ56 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm6729-201ENSMUST00000165173 1452 ntBASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm38195-201ENSMUST00000194247 1499 ntBASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm38262-201ENSMUST00000194760 1382 ntBASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm22438-201ENSMUST00000104049 132 ntBASIC6.88□□□□□ -1.31
Use1Q9CQ56 Fgf2-203ENSMUST00000108120 526 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Tmem91-202ENSMUST00000108404 485 ntTSL 5 BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm13858-201ENSMUST00000118862 671 ntBASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm1947-201ENSMUST00000122451 910 ntBASIC6.88□□□□□ -1.31
Use1Q9CQ56 n-R5s47-201ENSMUST00000122516 119 ntBASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm5611-201ENSMUST00000164523 852 ntBASIC6.88□□□□□ -1.31
Use1Q9CQ56 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm4781-201ENSMUST00000167995 781 ntBASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm8046-201ENSMUST00000172151 616 ntBASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm29008-201ENSMUST00000189387 298 ntBASIC6.88□□□□□ -1.31
Use1Q9CQ56 Ms4a10-203ENSMUST00000191343 862 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm17965-201ENSMUST00000193904 517 ntBASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm35108-201ENSMUST00000194321 699 ntBASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm33191-201ENSMUST00000195604 699 ntBASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm43539-201ENSMUST00000196190 363 ntTSL 3 BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC6.88□□□□□ -1.31
Use1Q9CQ56 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm43929-201ENSMUST00000203025 409 ntBASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm5154-201ENSMUST00000203971 399 ntBASIC6.88□□□□□ -1.31
Use1Q9CQ56 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Use1Q9CQ56 AC158799.1-201ENSMUST00000214686 617 ntTSL 5 BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm19154-201ENSMUST00000223330 940 ntBASIC6.88□□□□□ -1.31
Use1Q9CQ56 Tmem216-201ENSMUST00000025569 1101 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Ms4a10-201ENSMUST00000072748 1011 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC6.88□□□□□ -1.31
Use1Q9CQ56 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Fgf2-202ENSMUST00000091203 535 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC6.88□□□□□ -1.31
Use1Q9CQ56 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm44185-201ENSMUST00000204539 3307 ntBASIC6.88□□□□□ -1.31
Use1Q9CQ56 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm43872-201ENSMUST00000203218 2213 ntBASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm18726-201ENSMUST00000218175 2010 ntBASIC6.88□□□□□ -1.31
Use1Q9CQ56 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Use1Q9CQ56 Gm37043-201ENSMUST00000194609 3105 ntBASIC6.87□□□□□ -1.31
Use1Q9CQ56 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm42898-201ENSMUST00000200370 3073 ntBASIC6.87□□□□□ -1.31
Use1Q9CQ56 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm43019-201ENSMUST00000196948 2863 ntBASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm42595-201ENSMUST00000196771 1607 ntBASIC6.87□□□□□ -1.31
Use1Q9CQ56 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Use1Q9CQ56 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Gm45251-201ENSMUST00000209486 1465 ntBASIC6.87□□□□□ -1.31
Use1Q9CQ56 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Use1Q9CQ56 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 107.2 ms