Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Csf3r-202ENSMUST00000106162 3481 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Rdh16-201ENSMUST00000071646 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Olfr338-203ENSMUST00000217511 5724 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Gm10568-201ENSMUST00000193244 1634 ntBASIC9.42□□□□□ -0.9
RtcbQ99LF4 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC9.42□□□□□ -0.9
RtcbQ99LF4 Stxbp5-202ENSMUST00000125200 3300 ntTSL 5 BASIC9.41□□□□□ -0.9
RtcbQ99LF4 Gm36401-201ENSMUST00000194255 2028 ntBASIC9.41□□□□□ -0.9
RtcbQ99LF4 Gm9256-201ENSMUST00000198106 1420 ntBASIC9.41□□□□□ -0.9
RtcbQ99LF4 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
RtcbQ99LF4 Gm6614-201ENSMUST00000111832 1953 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
RtcbQ99LF4 Nudt13-201ENSMUST00000022343 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
RtcbQ99LF4 Rpgr-203ENSMUST00000073392 2926 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
RtcbQ99LF4 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC9.41□□□□□ -0.9
RtcbQ99LF4 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
RtcbQ99LF4 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
RtcbQ99LF4 Gm6142-201ENSMUST00000120290 325 ntBASIC9.41□□□□□ -0.9
RtcbQ99LF4 Gm15192-201ENSMUST00000121005 293 ntBASIC9.41□□□□□ -0.9
RtcbQ99LF4 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC9.41□□□□□ -0.9
RtcbQ99LF4 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
RtcbQ99LF4 Gm29464-201ENSMUST00000187692 513 ntBASIC9.41□□□□□ -0.9
RtcbQ99LF4 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC9.41□□□□□ -0.9
RtcbQ99LF4 Gm9114-201ENSMUST00000188558 997 ntBASIC9.41□□□□□ -0.9
RtcbQ99LF4 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC9.41□□□□□ -0.9
RtcbQ99LF4 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC9.41□□□□□ -0.9
RtcbQ99LF4 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC9.41□□□□□ -0.9
RtcbQ99LF4 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
RtcbQ99LF4 AC151967.1-201ENSMUST00000198146 76 ntBASIC9.41□□□□□ -0.9
RtcbQ99LF4 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC9.41□□□□□ -0.9
RtcbQ99LF4 Gm7443-201ENSMUST00000206355 378 ntBASIC9.41□□□□□ -0.9
RtcbQ99LF4 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
RtcbQ99LF4 AC151901.1-201ENSMUST00000218274 180 ntBASIC9.41□□□□□ -0.9
RtcbQ99LF4 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC9.41□□□□□ -0.9
RtcbQ99LF4 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
RtcbQ99LF4 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
RtcbQ99LF4 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
RtcbQ99LF4 Synpo2-201ENSMUST00000051443 3719 ntBASIC9.41□□□□□ -0.9
RtcbQ99LF4 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
RtcbQ99LF4 Gm4849-201ENSMUST00000188428 2246 ntBASIC9.41□□□□□ -0.9
RtcbQ99LF4 Trim21-202ENSMUST00000106913 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
RtcbQ99LF4 Gm43488-201ENSMUST00000198874 2504 ntBASIC9.41□□□□□ -0.9
RtcbQ99LF4 Tenm1-201ENSMUST00000016294 8365 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
RtcbQ99LF4 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
RtcbQ99LF4 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC9.41□□□□□ -0.9
RtcbQ99LF4 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
RtcbQ99LF4 Ptges-202ENSMUST00000102852 3647 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
RtcbQ99LF4 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC9.4□□□□□ -0.9
RtcbQ99LF4 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
RtcbQ99LF4 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
RtcbQ99LF4 Zfp942-202ENSMUST00000091879 3265 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
RtcbQ99LF4 Rbpj-208ENSMUST00000201912 5485 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
RtcbQ99LF4 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
RtcbQ99LF4 Creb1-201ENSMUST00000049932 5009 ntTSL 5 BASIC9.4□□□□□ -0.9
RtcbQ99LF4 Unc5c-201ENSMUST00000075282 3890 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
RtcbQ99LF4 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
RtcbQ99LF4 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
RtcbQ99LF4 Gm25877-201ENSMUST00000104326 129 ntBASIC9.4□□□□□ -0.9
RtcbQ99LF4 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
RtcbQ99LF4 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
RtcbQ99LF4 Gm15484-201ENSMUST00000118871 828 ntBASIC9.4□□□□□ -0.9
RtcbQ99LF4 Gm16056-201ENSMUST00000119293 135 ntBASIC9.4□□□□□ -0.9
RtcbQ99LF4 Gm13900-201ENSMUST00000119402 498 ntBASIC9.4□□□□□ -0.9
RtcbQ99LF4 Gm12955-201ENSMUST00000119689 957 ntBASIC9.4□□□□□ -0.9
RtcbQ99LF4 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC9.4□□□□□ -0.9
RtcbQ99LF4 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
RtcbQ99LF4 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC9.4□□□□□ -0.9
RtcbQ99LF4 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
RtcbQ99LF4 Gm26505-201ENSMUST00000176208 166 ntBASIC9.4□□□□□ -0.9
RtcbQ99LF4 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC9.4□□□□□ -0.9
RtcbQ99LF4 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC9.4□□□□□ -0.9
RtcbQ99LF4 Gm37260-201ENSMUST00000193748 1251 ntBASIC9.4□□□□□ -0.9
RtcbQ99LF4 Gm43560-201ENSMUST00000198100 773 ntBASIC9.4□□□□□ -0.9
RtcbQ99LF4 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
RtcbQ99LF4 Gm43926-201ENSMUST00000203978 430 ntBASIC9.4□□□□□ -0.9
RtcbQ99LF4 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC9.4□□□□□ -0.9
RtcbQ99LF4 Gm4972-201ENSMUST00000211108 1254 ntBASIC9.4□□□□□ -0.9
RtcbQ99LF4 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC9.4□□□□□ -0.9
RtcbQ99LF4 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC9.4□□□□□ -0.9
RtcbQ99LF4 AC116589.4-201ENSMUST00000222390 216 ntBASIC9.4□□□□□ -0.9
RtcbQ99LF4 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
RtcbQ99LF4 AV026068-229ENSMUST00000225516 595 ntBASIC9.4□□□□□ -0.9
RtcbQ99LF4 Pigr-201ENSMUST00000027675 3849 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
RtcbQ99LF4 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC9.4□□□□□ -0.9
RtcbQ99LF4 Pex5l-208ENSMUST00000192093 3421 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
RtcbQ99LF4 Olfr56-206ENSMUST00000203810 1990 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
RtcbQ99LF4 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC9.4□□□□□ -0.9
RtcbQ99LF4 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
RtcbQ99LF4 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
RtcbQ99LF4 Pes1-202ENSMUST00000109985 2923 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
RtcbQ99LF4 Pes1-201ENSMUST00000020705 2911 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
RtcbQ99LF4 Dlg2-201ENSMUST00000074273 5278 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
RtcbQ99LF4 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC9.4□□□□□ -0.91
RtcbQ99LF4 Oasl2-201ENSMUST00000031542 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
RtcbQ99LF4 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
RtcbQ99LF4 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
RtcbQ99LF4 Serping1-201ENSMUST00000023994 1768 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
RtcbQ99LF4 Mbnl3-202ENSMUST00000114875 4649 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms