Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Gm43581-201ENSMUST00000196766 2864 ntBASIC8.64□□□□□ -1.03
Nup88Q8CEC0 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Gm44022-201ENSMUST00000203708 5429 ntBASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Gm23323-201ENSMUST00000104471 133 ntBASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Gm14248-201ENSMUST00000117790 544 ntBASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Gm13739-201ENSMUST00000118020 530 ntBASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Gm12601-201ENSMUST00000118994 846 ntBASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Gm5759-201ENSMUST00000119203 811 ntBASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Gm12331-201ENSMUST00000119927 622 ntBASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Mir6769b-201ENSMUST00000184793 60 ntBASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Mir6409-201ENSMUST00000184957 92 ntBASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Gm44147-201ENSMUST00000204658 94 ntBASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Gm46311-201ENSMUST00000217971 203 ntBASIC8.64□□□□□ -1.03
Nup88Q8CEC0 AC192091.1-201ENSMUST00000218668 439 ntBASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Cthrc1-204ENSMUST00000226433 596 ntBASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC8.64□□□□□ -1.03
Nup88Q8CEC0 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Gm14509-201ENSMUST00000117312 1286 ntBASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Gm11865-201ENSMUST00000118093 859 ntBASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Gm15778-201ENSMUST00000118469 608 ntBASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Gm13525-201ENSMUST00000120607 478 ntBASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Gm7436-201ENSMUST00000187229 391 ntBASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Gm28164-201ENSMUST00000190143 442 ntBASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Gm36932-201ENSMUST00000195226 929 ntBASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Gm45432-201ENSMUST00000210391 416 ntBASIC8.63□□□□□ -1.03
Nup88Q8CEC0 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC8.63□□□□□ -1.03
Nup88Q8CEC0 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC8.63□□□□□ -1.03
Nup88Q8CEC0 AC124450.1-201ENSMUST00000225569 495 ntBASIC8.63□□□□□ -1.03
Nup88Q8CEC0 AC135292.2-201ENSMUST00000227559 367 ntBASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Gm24613-201ENSMUST00000083266 130 ntBASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC8.63□□□□□ -1.03
Nup88Q8CEC0 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Nup88Q8CEC0 Gm7562-201ENSMUST00000210502 2537 ntBASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Gm37426-201ENSMUST00000195241 2470 ntBASIC8.62□□□□□ -1.03
Nup88Q8CEC0 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Gm2654-201ENSMUST00000221381 1592 ntBASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Gm37304-201ENSMUST00000193833 2886 ntBASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Gm8577-201ENSMUST00000122420 986 ntBASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC8.62□□□□□ -1.03
Nup88Q8CEC0 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms