Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Ccdc38Q8CDN8 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Gm12919-201ENSMUST00000119855 1594 ntBASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Gm37086-201ENSMUST00000193082 3452 ntBASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Gm37984-201ENSMUST00000191641 3733 ntBASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Gm24462-201ENSMUST00000102430 106 ntBASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Gm13521-201ENSMUST00000118922 866 ntBASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Gm5270-201ENSMUST00000121506 1002 ntBASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Gm12499-201ENSMUST00000121961 546 ntBASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Gm11203-201ENSMUST00000122169 741 ntBASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Gm22670-201ENSMUST00000158724 143 ntBASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Gm4781-201ENSMUST00000167995 781 ntBASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Gm37825-201ENSMUST00000193141 904 ntTSL 5 BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Gm36667-201ENSMUST00000196125 753 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Gm44471-201ENSMUST00000197963 100 ntBASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 AC126939.4-201ENSMUST00000225360 743 ntBASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 AC159195.2-201ENSMUST00000223670 3757 ntBASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Ccdc38Q8CDN8 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC8.21□□□□□ -1.09
Ccdc38Q8CDN8 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Ccdc38Q8CDN8 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Ccdc38Q8CDN8 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Ccdc38Q8CDN8 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Ccdc38Q8CDN8 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Ccdc38Q8CDN8 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Ccdc38Q8CDN8 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Ccdc38Q8CDN8 Gm43123-201ENSMUST00000201893 3471 ntBASIC8.21□□□□□ -1.09
Ccdc38Q8CDN8 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Gm22438-201ENSMUST00000104049 132 ntBASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Gm12828-201ENSMUST00000136115 289 ntTSL 3 BASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Gm18033-201ENSMUST00000186678 550 ntBASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Gm28728-201ENSMUST00000189087 405 ntBASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Gm42161-201ENSMUST00000196278 726 ntTSL 5 BASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Gm19175-201ENSMUST00000199895 916 ntBASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Gm45782-201ENSMUST00000212670 366 ntBASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 AC160635.1-201ENSMUST00000216731 474 ntBASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 AC154382.1-201ENSMUST00000220958 1282 ntBASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Mir24-2-201ENSMUST00000083607 107 ntBASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 H2al1j-201ENSMUST00000091180 330 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Gm6767-201ENSMUST00000118650 1381 ntBASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Ccdc38Q8CDN8 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 AC164567.3-201ENSMUST00000217743 2869 ntBASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Gm28651-202ENSMUST00000227968 2693 ntBASIC8.2□□□□□ -1.1
Ccdc38Q8CDN8 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms