Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Ccdc87Q8CDL9 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Ccdc87Q8CDL9 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Gm11853-201ENSMUST00000119687 1384 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Gm38368-201ENSMUST00000193181 1335 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Gm37080-201ENSMUST00000194804 2404 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Gm24071-201ENSMUST00000104520 132 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Gm16221-201ENSMUST00000117331 393 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Gm13702-201ENSMUST00000118542 825 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Gm14749-201ENSMUST00000121269 333 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Gm15530-201ENSMUST00000122206 555 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Gm24883-201ENSMUST00000158391 281 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 0610012D04Rik-201ENSMUST00000159031 531 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Traj54-201ENSMUST00000165071 54 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Gm19840-201ENSMUST00000169624 882 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Gm24576-201ENSMUST00000175508 248 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Gm18699-201ENSMUST00000190713 243 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Gm37871-201ENSMUST00000194973 688 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Gm18985-201ENSMUST00000196472 1079 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Gm18330-201ENSMUST00000199246 547 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Gm21461-201ENSMUST00000200382 863 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Gm44252-201ENSMUST00000204187 330 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Gm18839-201ENSMUST00000204292 670 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 AC165349.2-201ENSMUST00000219097 426 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 AC158536.1-201ENSMUST00000222510 256 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 AC154441.1-201ENSMUST00000223653 1006 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 AC140208.1-201ENSMUST00000226609 285 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 AC151902.1-201ENSMUST00000227800 375 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Gm5316-201ENSMUST00000050391 270 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Gm37968-201ENSMUST00000195131 3201 ntBASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
Ccdc87Q8CDL9 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Gm9256-201ENSMUST00000198106 1420 ntBASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Gm38288-201ENSMUST00000195330 1320 ntBASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 St7-206ENSMUST00000115417 2168 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Gm16204-201ENSMUST00000117864 1897 ntBASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Gm4991-201ENSMUST00000118899 1552 ntBASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 AL450321.1-201ENSMUST00000220600 3550 ntBASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Gm25167-201ENSMUST00000104188 120 ntBASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Gm14466-201ENSMUST00000119028 451 ntBASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Gm11343-201ENSMUST00000120579 599 ntBASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Gm13366-201ENSMUST00000122198 970 ntBASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Gm22764-201ENSMUST00000158370 92 ntBASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Gm23117-201ENSMUST00000158482 108 ntBASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Gm17129-201ENSMUST00000168168 505 ntBASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Gm8304-201ENSMUST00000185744 584 ntBASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Gm18349-201ENSMUST00000187440 904 ntBASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Gm29562-201ENSMUST00000190113 904 ntBASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Gm37310-201ENSMUST00000195237 2968 ntBASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 0610006L08Rik-202ENSMUST00000206672 803 ntTSL 3 BASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Gm45888-201ENSMUST00000212348 1229 ntBASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Gm45782-201ENSMUST00000212670 366 ntBASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC7.86□□□□□ -1.15
Ccdc87Q8CDL9 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC7.86□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms