Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm14201-201ENSMUST00000117627 289 ntBASIC8.79□□□□□ -1
Atg4aQ8C9S8 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC8.79□□□□□ -1
Atg4aQ8C9S8 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC8.79□□□□□ -1
Atg4aQ8C9S8 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC8.79□□□□□ -1
Atg4aQ8C9S8 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC8.79□□□□□ -1
Atg4aQ8C9S8 Gm22035-201ENSMUST00000157284 228 ntBASIC8.79□□□□□ -1
Atg4aQ8C9S8 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Gm3121-201ENSMUST00000187086 406 ntBASIC8.79□□□□□ -1
Atg4aQ8C9S8 Gm6472-202ENSMUST00000187973 582 ntBASIC8.79□□□□□ -1
Atg4aQ8C9S8 Gm38022-201ENSMUST00000191762 403 ntBASIC8.79□□□□□ -1
Atg4aQ8C9S8 Gm37349-201ENSMUST00000194205 624 ntBASIC8.79□□□□□ -1
Atg4aQ8C9S8 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC8.79□□□□□ -1
Atg4aQ8C9S8 AC127224.1-201ENSMUST00000218094 453 ntBASIC8.79□□□□□ -1
Atg4aQ8C9S8 Diaph3-204ENSMUST00000226254 682 ntBASIC8.79□□□□□ -1
Atg4aQ8C9S8 AC140451.1-201ENSMUST00000227984 737 ntBASIC8.79□□□□□ -1
Atg4aQ8C9S8 Gm10247-201ENSMUST00000090395 333 ntBASIC8.79□□□□□ -1
Atg4aQ8C9S8 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Gm37924-201ENSMUST00000195470 3647 ntBASIC8.79□□□□□ -1
Atg4aQ8C9S8 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Atg4aQ8C9S8 AC111010.1-203ENSMUST00000227287 1548 ntBASIC8.79□□□□□ -1
Atg4aQ8C9S8 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Atg4aQ8C9S8 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Atg4aQ8C9S8 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Atg4aQ8C9S8 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC8.78□□□□□ -1
Atg4aQ8C9S8 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC8.78□□□□□ -1
Atg4aQ8C9S8 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC8.78□□□□□ -1
Atg4aQ8C9S8 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC8.78□□□□□ -1
Atg4aQ8C9S8 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC8.78□□□□□ -1
Atg4aQ8C9S8 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Atg4aQ8C9S8 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Atg4aQ8C9S8 Gm12021-201ENSMUST00000121061 1746 ntBASIC8.78□□□□□ -1
Atg4aQ8C9S8 Gm24284-201ENSMUST00000104240 142 ntBASIC8.78□□□□□ -1
Atg4aQ8C9S8 Gm13878-201ENSMUST00000117986 577 ntBASIC8.78□□□□□ -1
Atg4aQ8C9S8 Gm8624-201ENSMUST00000118083 432 ntBASIC8.78□□□□□ -1
Atg4aQ8C9S8 Gm12944-201ENSMUST00000119262 463 ntBASIC8.78□□□□□ -1
Atg4aQ8C9S8 Gm11263-201ENSMUST00000121853 749 ntBASIC8.78□□□□□ -1
Atg4aQ8C9S8 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC8.78□□□□□ -1
Atg4aQ8C9S8 Gm7481-201ENSMUST00000182020 995 ntBASIC8.78□□□□□ -1
Atg4aQ8C9S8 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC8.78□□□□□ -1
Atg4aQ8C9S8 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC8.78□□□□□ -1
Atg4aQ8C9S8 Gm8101-201ENSMUST00000192796 478 ntBASIC8.78□□□□□ -1
Atg4aQ8C9S8 Gm8921-201ENSMUST00000204306 649 ntBASIC8.78□□□□□ -1
Atg4aQ8C9S8 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC8.78□□□□□ -1
Atg4aQ8C9S8 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC8.78□□□□□ -1
Atg4aQ8C9S8 Gm17611-202ENSMUST00000220613 814 ntBASIC8.78□□□□□ -1
Atg4aQ8C9S8 CT025630.2-201ENSMUST00000228293 487 ntBASIC8.78□□□□□ -1
Atg4aQ8C9S8 Gm2840-201ENSMUST00000048361 411 ntBASIC8.78□□□□□ -1
Atg4aQ8C9S8 Olfr683-201ENSMUST00000061284 960 ntBASIC8.78□□□□□ -1
Atg4aQ8C9S8 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Atg4aQ8C9S8 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Atg4aQ8C9S8 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC8.78□□□□□ -1
Atg4aQ8C9S8 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Atg4aQ8C9S8 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Atg4aQ8C9S8 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Atg4aQ8C9S8 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Atg4aQ8C9S8 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Atg4aQ8C9S8 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC8.78□□□□□ -1
Atg4aQ8C9S8 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Atg4aQ8C9S8 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Atg4aQ8C9S8 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Atg4aQ8C9S8 Ahi1-202ENSMUST00000163505 2067 ntTSL 1 (best) BASIC8.77□□□□□ -1
Atg4aQ8C9S8 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1
Atg4aQ8C9S8 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Gm10693-201ENSMUST00000144146 2037 ntBASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Gm7091-201ENSMUST00000116438 586 ntBASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Gm13940-201ENSMUST00000121023 301 ntBASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Gm14990-201ENSMUST00000122354 445 ntBASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Gm25505-201ENSMUST00000157220 246 ntBASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Gm26323-201ENSMUST00000157743 175 ntBASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Gm27972-201ENSMUST00000184720 137 ntBASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 AC158954.1-201ENSMUST00000228272 1006 ntBASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Atg4aQ8C9S8 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms