Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm17833-201ENSMUST00000197629 1065 ntBASIC8.49□□□□□ -1.05
Alx1Q8C8B0 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Alx1Q8C8B0 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC8.49□□□□□ -1.05
Alx1Q8C8B0 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC8.49□□□□□ -1.05
Alx1Q8C8B0 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC8.49□□□□□ -1.05
Alx1Q8C8B0 Gm36758-201ENSMUST00000222594 310 ntBASIC8.49□□□□□ -1.05
Alx1Q8C8B0 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Alx1Q8C8B0 AC133598.2-201ENSMUST00000224302 624 ntBASIC8.49□□□□□ -1.05
Alx1Q8C8B0 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Alx1Q8C8B0 Gm9800-201ENSMUST00000052615 336 ntBASIC8.49□□□□□ -1.05
Alx1Q8C8B0 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Alx1Q8C8B0 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Alx1Q8C8B0 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Alx1Q8C8B0 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Alx1Q8C8B0 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Alx1Q8C8B0 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Alx1Q8C8B0 Sptan1-201ENSMUST00000046257 7820 ntTSL 5 BASIC8.49□□□□□ -1.05
Alx1Q8C8B0 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Alx1Q8C8B0 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Alx1Q8C8B0 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC8.49□□□□□ -1.05
Alx1Q8C8B0 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Alx1Q8C8B0 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Alx1Q8C8B0 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC8.49□□□□□ -1.05
Alx1Q8C8B0 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
Alx1Q8C8B0 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC8.49□□□□□ -1.05
Alx1Q8C8B0 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC8.49□□□□□ -1.05
Alx1Q8C8B0 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Alx1Q8C8B0 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Gm26575-201ENSMUST00000181714 2232 ntBASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Gm13301-201ENSMUST00000121728 2446 ntBASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Gm25631-201ENSMUST00000104390 130 ntBASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Gm15105-201ENSMUST00000117777 204 ntBASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Gm25178-201ENSMUST00000122633 325 ntBASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Gm5970-201ENSMUST00000131638 1216 ntBASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Gm16284-201ENSMUST00000140995 400 ntBASIC8.48□□□□□ -1.05
Alx1Q8C8B0 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC8.48□□□□□ -1.05
Alx1Q8C8B0 n-R5s93-201ENSMUST00000180091 119 ntBASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Mir378d-201ENSMUST00000184232 110 ntBASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Gm28580-201ENSMUST00000186767 88 ntBASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Gm38373-201ENSMUST00000192042 288 ntBASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Gm7512-201ENSMUST00000195217 1170 ntBASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Gm24826-202ENSMUST00000197298 216 ntBASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Gm42804-201ENSMUST00000199701 178 ntBASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Gm18593-201ENSMUST00000200754 1139 ntBASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC8.48□□□□□ -1.05
Alx1Q8C8B0 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Gm35638-201ENSMUST00000220724 652 ntBASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Gm37783-201ENSMUST00000192025 1856 ntBASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Gm13821-201ENSMUST00000202029 3201 ntBASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Alx1Q8C8B0 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 Gm22707-201ENSMUST00000103834 110 ntBASIC8.47□□□□□ -1.05
Alx1Q8C8B0 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 Gm17184-201ENSMUST00000111864 462 ntBASIC8.47□□□□□ -1.05
Alx1Q8C8B0 Gm13744-201ENSMUST00000118953 850 ntBASIC8.47□□□□□ -1.05
Alx1Q8C8B0 Gm22275-201ENSMUST00000122470 310 ntBASIC8.47□□□□□ -1.05
Alx1Q8C8B0 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 Gm19092-201ENSMUST00000209036 969 ntBASIC8.47□□□□□ -1.05
Alx1Q8C8B0 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Alx1Q8C8B0 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms