Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm44178-201ENSMUST00000205229 2930 ntBASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim9Q8C7M3 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim9Q8C7M3 CT009604.1-201ENSMUST00000223900 1328 ntBASIC8.03□□□□□ -1.12
Trim9Q8C7M3 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Gm43769-201ENSMUST00000201871 4323 ntBASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Gm15665-201ENSMUST00000119116 847 ntBASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Gm25178-201ENSMUST00000122633 325 ntBASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Gm2709-201ENSMUST00000142979 350 ntBASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Gm28745-201ENSMUST00000190069 305 ntBASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Gm18699-201ENSMUST00000190713 243 ntBASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Gm5708-201ENSMUST00000196289 886 ntBASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Gm43905-201ENSMUST00000204516 204 ntBASIC8.03□□□□□ -1.12
Trim9Q8C7M3 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim9Q8C7M3 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim9Q8C7M3 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Trim9Q8C7M3 AC154838.3-201ENSMUST00000228876 965 ntBASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Gm37161-201ENSMUST00000191994 2697 ntBASIC8.03□□□□□ -1.12
Trim9Q8C7M3 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim9Q8C7M3 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC8.02□□□□□ -1.12
Trim9Q8C7M3 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.12
Trim9Q8C7M3 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Gm42568-201ENSMUST00000195639 1841 ntBASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Mir683-2-201ENSMUST00000102099 109 ntBASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Gm15203-201ENSMUST00000117668 455 ntBASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Gm15778-201ENSMUST00000118469 608 ntBASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Gm24782-201ENSMUST00000157641 132 ntBASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Mir683-1-201ENSMUST00000179371 109 ntBASIC8.02□□□□□ -1.13
Trim9Q8C7M3 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Gm37977-201ENSMUST00000193096 721 ntBASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Gm38079-201ENSMUST00000195603 154 ntBASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Gm7419-201ENSMUST00000209962 925 ntBASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 CT009757.6-201ENSMUST00000220661 2312 ntBASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Trim9Q8C7M3 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim9Q8C7M3 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim9Q8C7M3 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim9Q8C7M3 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Trim9Q8C7M3 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC8.01□□□□□ -1.13
Trim9Q8C7M3 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim9Q8C7M3 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim9Q8C7M3 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim9Q8C7M3 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim9Q8C7M3 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim9Q8C7M3 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Trim9Q8C7M3 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim9Q8C7M3 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim9Q8C7M3 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms