Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm37161-201ENSMUST00000191994 2697 ntBASIC7.48□□□□□ -1.21
Trub1Q8C0D0 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Gm42568-201ENSMUST00000195639 1841 ntBASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Gm37745-201ENSMUST00000193304 8163 ntBASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Gm15000-201ENSMUST00000118275 1243 ntBASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Gm24782-201ENSMUST00000157641 132 ntBASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Gm37977-201ENSMUST00000193096 721 ntBASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Gm43387-201ENSMUST00000196896 1066 ntBASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC7.48□□□□□ -1.21
Trub1Q8C0D0 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Gm5586-201ENSMUST00000206264 795 ntBASIC7.48□□□□□ -1.21
Trub1Q8C0D0 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 AC159205.1-201ENSMUST00000225513 1099 ntBASIC7.48□□□□□ -1.21
Trub1Q8C0D0 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 AC158954.1-201ENSMUST00000228272 1006 ntBASIC7.48□□□□□ -1.21
Trub1Q8C0D0 AC154838.3-201ENSMUST00000228876 965 ntBASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Gm43099-201ENSMUST00000198943 5241 ntBASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC7.48□□□□□ -1.21
Trub1Q8C0D0 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Gm18194-202ENSMUST00000210952 3442 ntBASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Gm6746-201ENSMUST00000108774 483 ntBASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Gm12754-201ENSMUST00000121908 454 ntBASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Gm10086-201ENSMUST00000136334 354 ntBASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Gm21182-201ENSMUST00000178899 794 ntBASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Gm27373-201ENSMUST00000184017 184 ntBASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Gm28142-201ENSMUST00000186899 698 ntBASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Gm36928-201ENSMUST00000192466 694 ntBASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Gm37325-201ENSMUST00000194971 694 ntBASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Gm38079-201ENSMUST00000195603 154 ntBASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Gm42932-201ENSMUST00000197280 744 ntBASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Gm43725-201ENSMUST00000200122 369 ntBASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Gm5154-201ENSMUST00000203971 399 ntBASIC7.47□□□□□ -1.21
Trub1Q8C0D0 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 n-R5s60-201ENSMUST00000083299 119 ntBASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Gm16020-201ENSMUST00000084281 210 ntBASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Gm44916-201ENSMUST00000208664 2194 ntBASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Trub1Q8C0D0 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms