Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Gm16116-201ENSMUST00000159472 430 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Gm28047Q3US59 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC8.68□□□□□ -1.02
Gm28047Q3US59 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC8.68□□□□□ -1.02
Gm28047Q3US59 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC8.68□□□□□ -1.02
Gm28047Q3US59 1700015G11Rik-201ENSMUST00000180038 397 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Gm28047Q3US59 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Gm28047Q3US59 Gm4891-201ENSMUST00000182279 912 ntBASIC8.68□□□□□ -1.02
Gm28047Q3US59 Gm28064-201ENSMUST00000185639 858 ntBASIC8.68□□□□□ -1.02
Gm28047Q3US59 Gm18800-202ENSMUST00000188688 1105 ntBASIC8.68□□□□□ -1.02
Gm28047Q3US59 Gm38177-201ENSMUST00000192213 1040 ntBASIC8.68□□□□□ -1.02
Gm28047Q3US59 Gm37433-201ENSMUST00000192695 678 ntBASIC8.68□□□□□ -1.02
Gm28047Q3US59 Gm37441-201ENSMUST00000194430 678 ntBASIC8.68□□□□□ -1.02
Gm28047Q3US59 Mir7116-201ENSMUST00000195956 70 ntBASIC8.68□□□□□ -1.02
Gm28047Q3US59 Gm44909-201ENSMUST00000208756 165 ntBASIC8.68□□□□□ -1.02
Gm28047Q3US59 AC155934.1-201ENSMUST00000213802 322 ntTSL 5 BASIC8.68□□□□□ -1.02
Gm28047Q3US59 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC8.68□□□□□ -1.02
Gm28047Q3US59 Gm46136-201ENSMUST00000214730 565 ntBASIC8.68□□□□□ -1.02
Gm28047Q3US59 AC163296.1-202ENSMUST00000218395 661 ntBASIC8.68□□□□□ -1.02
Gm28047Q3US59 Gm4898-201ENSMUST00000218519 832 ntBASIC8.68□□□□□ -1.02
Gm28047Q3US59 AC192091.1-201ENSMUST00000218668 439 ntBASIC8.68□□□□□ -1.02
Gm28047Q3US59 AC163296.1-201ENSMUST00000220004 1266 ntBASIC8.68□□□□□ -1.02
Gm28047Q3US59 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC8.68□□□□□ -1.02
Gm28047Q3US59 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Gm28047Q3US59 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Gm28047Q3US59 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC8.68□□□□□ -1.02
Gm28047Q3US59 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Gm28047Q3US59 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Gm28047Q3US59 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Gm28047Q3US59 Klf10-202ENSMUST00000226363 2917 ntBASIC8.68□□□□□ -1.02
Gm28047Q3US59 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Gm28047Q3US59 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC8.68□□□□□ -1.02
Gm28047Q3US59 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Gm28047Q3US59 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Gm28047Q3US59 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC8.68□□□□□ -1.02
Gm28047Q3US59 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm42837-201ENSMUST00000197071 2829 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC8.67□□□□□ -1.02
Gm28047Q3US59 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm14388-201ENSMUST00000118119 477 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm9506-201ENSMUST00000118516 320 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm14000-201ENSMUST00000118670 233 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm13552-201ENSMUST00000118837 417 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm11969-201ENSMUST00000118848 356 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm13915-201ENSMUST00000119314 931 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm14900-201ENSMUST00000120304 733 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm8084-201ENSMUST00000120807 752 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm11895-201ENSMUST00000122165 467 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm11961-201ENSMUST00000135775 1319 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm23220-201ENSMUST00000158115 137 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm16580-201ENSMUST00000162696 1044 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm7031-201ENSMUST00000173709 919 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
Gm28047Q3US59 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 Mir7115-201ENSMUST00000184275 64 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm28421-201ENSMUST00000186378 356 ntTSL 5 BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm28355-201ENSMUST00000187443 356 ntTSL 5 BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm17970-201ENSMUST00000192199 685 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm34217-201ENSMUST00000193562 356 ntTSL 5 BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm19035-202ENSMUST00000194575 959 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm37676-201ENSMUST00000195496 507 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm42489-201ENSMUST00000198964 669 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Olfr664-202ENSMUST00000211596 921 ntAPPRIS ALT2 BASIC8.67□□□□□ -1.02
Gm28047Q3US59 AC153845.1-201ENSMUST00000213596 428 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm7842-201ENSMUST00000217691 1379 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm9110-201ENSMUST00000219035 617 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 AC165349.2-201ENSMUST00000219097 426 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Gm28047Q3US59 CT030170.6-202ENSMUST00000223186 544 ntBASIC8.67□□□□□ -1.02
Gm28047Q3US59 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Gm28047Q3US59 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms