Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sf3b2Q3UJB0 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Stmn2-201ENSMUST00000029002 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Zfp658-202ENSMUST00000107972 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 CT009711.1-201ENSMUST00000223992 3040 ntBASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Gm22927-201ENSMUST00000104268 131 ntBASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Gm14869-201ENSMUST00000119007 884 ntBASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Gm24545-201ENSMUST00000158651 85 ntBASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Gm5871-201ENSMUST00000176461 718 ntBASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Gm37517-201ENSMUST00000194004 1289 ntBASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 AC165349.1-201ENSMUST00000217896 424 ntBASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Ugt1a6b-202ENSMUST00000113138 2303 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Serpina3f-201ENSMUST00000101080 2207 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Crtam-201ENSMUST00000034519 1876 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Gm38352-201ENSMUST00000194459 2557 ntBASIC9.68□□□□□ -0.86
Sf3b2Q3UJB0 Runx1-207ENSMUST00000189679 2538 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Hypk-202ENSMUST00000110612 4170 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Napepld-201ENSMUST00000060899 3724 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Hnf4g-201ENSMUST00000108393 2224 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Gm38288-201ENSMUST00000195330 1320 ntBASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Il1rl2-201ENSMUST00000095020 1950 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Gm15578-201ENSMUST00000117320 475 ntBASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Gm11434-201ENSMUST00000122379 629 ntBASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Gm9285-201ENSMUST00000177691 697 ntBASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Gm8305-201ENSMUST00000180022 1195 ntBASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 n-R5s93-201ENSMUST00000180091 119 ntBASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Gm8241-201ENSMUST00000189286 816 ntBASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Gm28586-201ENSMUST00000189857 456 ntBASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 AC163651.1-201ENSMUST00000222500 372 ntBASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Cacna2d4-205ENSMUST00000186622 3710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 AC159264.1-202ENSMUST00000224856 3162 ntBASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 4430402I18Rik-208ENSMUST00000179171 2638 ntTSL 5 BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Olfr523-202ENSMUST00000209314 3677 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Pik3cg-207ENSMUST00000220366 4660 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Sf3b2Q3UJB0 Gm42848-201ENSMUST00000201477 2022 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sf3b2Q3UJB0 Tdrd3-205ENSMUST00000170865 2530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sf3b2Q3UJB0 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sf3b2Q3UJB0 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sf3b2Q3UJB0 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sf3b2Q3UJB0 AC129208.1-201ENSMUST00000227474 2906 ntBASIC9.66□□□□□ -0.86
Sf3b2Q3UJB0 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sf3b2Q3UJB0 Sipa1l1-208ENSMUST00000222298 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sf3b2Q3UJB0 Gm6679-201ENSMUST00000191467 1869 ntBASIC9.66□□□□□ -0.86
Sf3b2Q3UJB0 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sf3b2Q3UJB0 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC9.66□□□□□ -0.86
Sf3b2Q3UJB0 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sf3b2Q3UJB0 Gm7842-201ENSMUST00000217691 1379 ntBASIC9.66□□□□□ -0.86
Sf3b2Q3UJB0 Tro-205ENSMUST00000151403 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sf3b2Q3UJB0 Trcg1-201ENSMUST00000093837 2701 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Sf3b2Q3UJB0 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Sf3b2Q3UJB0 Etl4-205ENSMUST00000114607 3055 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Sf3b2Q3UJB0 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sf3b2Q3UJB0 Gm2108-201ENSMUST00000165058 2177 ntBASIC9.66□□□□□ -0.86
Sf3b2Q3UJB0 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Sf3b2Q3UJB0 Gm13622-201ENSMUST00000120658 433 ntBASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 110 ms