Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H3f3aP84244 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
H3f3aP84244 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
H3f3aP84244 Gm10601-201ENSMUST00000120436 1422 ntBASIC6.54□□□□□ -1.36
H3f3aP84244 AC154141.1-201ENSMUST00000208403 4136 ntBASIC6.54□□□□□ -1.36
H3f3aP84244 Gm22470-201ENSMUST00000104117 130 ntBASIC6.54□□□□□ -1.36
H3f3aP84244 Gm7091-201ENSMUST00000116438 586 ntBASIC6.54□□□□□ -1.36
H3f3aP84244 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H3f3aP84244 Gm15778-201ENSMUST00000118469 608 ntBASIC6.54□□□□□ -1.36
H3f3aP84244 Gm13313-201ENSMUST00000118938 1084 ntBASIC6.54□□□□□ -1.36
H3f3aP84244 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC6.54□□□□□ -1.36
H3f3aP84244 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC6.54□□□□□ -1.36
H3f3aP84244 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC6.54□□□□□ -1.36
H3f3aP84244 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC6.54□□□□□ -1.36
H3f3aP84244 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC6.54□□□□□ -1.36
H3f3aP84244 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H3f3aP84244 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H3f3aP84244 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H3f3aP84244 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
H3f3aP84244 Gm42696-201ENSMUST00000199859 1142 ntBASIC6.54□□□□□ -1.36
H3f3aP84244 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC6.54□□□□□ -1.36
H3f3aP84244 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H3f3aP84244 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H3f3aP84244 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
H3f3aP84244 Gm18562-201ENSMUST00000209949 915 ntBASIC6.54□□□□□ -1.36
H3f3aP84244 AC160338.3-201ENSMUST00000214836 384 ntBASIC6.54□□□□□ -1.36
H3f3aP84244 AC124778.1-201ENSMUST00000216013 162 ntBASIC6.54□□□□□ -1.36
H3f3aP84244 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC6.54□□□□□ -1.36
H3f3aP84244 Gm19011-201ENSMUST00000221777 808 ntBASIC6.54□□□□□ -1.36
H3f3aP84244 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
H3f3aP84244 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
H3f3aP84244 Gm37460-201ENSMUST00000191796 2249 ntBASIC6.54□□□□□ -1.36
H3f3aP84244 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
H3f3aP84244 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H3f3aP84244 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC6.54□□□□□ -1.36
H3f3aP84244 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
H3f3aP84244 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
H3f3aP84244 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H3f3aP84244 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
H3f3aP84244 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
H3f3aP84244 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
H3f3aP84244 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
H3f3aP84244 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
H3f3aP84244 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
H3f3aP84244 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
H3f3aP84244 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
H3f3aP84244 Gm21152-201ENSMUST00000190271 3483 ntBASIC6.53□□□□□ -1.36
H3f3aP84244 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
H3f3aP84244 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
H3f3aP84244 Gm43488-201ENSMUST00000198874 2504 ntBASIC6.53□□□□□ -1.36
H3f3aP84244 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC6.53□□□□□ -1.36
H3f3aP84244 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
H3f3aP84244 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
H3f3aP84244 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
H3f3aP84244 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
H3f3aP84244 Gm45360-201ENSMUST00000210698 1405 ntBASIC6.53□□□□□ -1.36
H3f3aP84244 Gm9585-201ENSMUST00000219681 1404 ntBASIC6.53□□□□□ -1.36
H3f3aP84244 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
H3f3aP84244 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
H3f3aP84244 Gm25614-201ENSMUST00000104013 133 ntBASIC6.53□□□□□ -1.36
H3f3aP84244 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
H3f3aP84244 Gm12306-201ENSMUST00000117256 171 ntBASIC6.53□□□□□ -1.36
H3f3aP84244 Gm11320-201ENSMUST00000119434 463 ntBASIC6.53□□□□□ -1.36
H3f3aP84244 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC6.53□□□□□ -1.36
H3f3aP84244 Gm15644-201ENSMUST00000121764 387 ntBASIC6.53□□□□□ -1.36
H3f3aP84244 Gm24782-201ENSMUST00000157641 132 ntBASIC6.53□□□□□ -1.36
H3f3aP84244 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
H3f3aP84244 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
H3f3aP84244 Gm24923-201ENSMUST00000178201 88 ntBASIC6.53□□□□□ -1.36
H3f3aP84244 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
H3f3aP84244 Mir8094-201ENSMUST00000183361 117 ntBASIC6.53□□□□□ -1.36
H3f3aP84244 Gm28142-201ENSMUST00000186899 698 ntBASIC6.53□□□□□ -1.36
H3f3aP84244 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
H3f3aP84244 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
H3f3aP84244 Gm9723-201ENSMUST00000192100 457 ntBASIC6.53□□□□□ -1.36
H3f3aP84244 Gm6197-201ENSMUST00000192273 454 ntBASIC6.53□□□□□ -1.36
H3f3aP84244 Gm35108-201ENSMUST00000194321 699 ntBASIC6.53□□□□□ -1.36
H3f3aP84244 Gm33191-201ENSMUST00000195604 699 ntBASIC6.53□□□□□ -1.36
H3f3aP84244 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC6.53□□□□□ -1.36
H3f3aP84244 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC6.53□□□□□ -1.36
H3f3aP84244 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC6.53□□□□□ -1.36
H3f3aP84244 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
H3f3aP84244 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC6.53□□□□□ -1.36
H3f3aP84244 Gm8844-201ENSMUST00000119460 2614 ntBASIC6.53□□□□□ -1.36
H3f3aP84244 CT025639.1-201ENSMUST00000223906 1375 ntBASIC6.53□□□□□ -1.36
H3f3aP84244 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
H3f3aP84244 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
H3f3aP84244 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.53□□□□□ -1.36
H3f3aP84244 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
H3f3aP84244 Gm43398-201ENSMUST00000196584 2742 ntBASIC6.53□□□□□ -1.36
H3f3aP84244 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC6.53□□□□□ -1.36
H3f3aP84244 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC6.53□□□□□ -1.36
H3f3aP84244 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC6.53□□□□□ -1.36
H3f3aP84244 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC6.53□□□□□ -1.36
H3f3aP84244 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
H3f3aP84244 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
H3f3aP84244 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
H3f3aP84244 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.36
H3f3aP84244 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC6.52□□□□□ -1.37
H3f3aP84244 Gm37891-201ENSMUST00000195585 1326 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms