Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Retnlb-201ENSMUST00000023328 695 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SgcaP82350 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SgcaP82350 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
SgcaP82350 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
SgcaP82350 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SgcaP82350 AC125487.1-201ENSMUST00000217888 1300 ntBASIC6.14□□□□□ -1.43
SgcaP82350 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.14□□□□□ -1.43
SgcaP82350 Wnk1-218ENSMUST00000161512 1426 ntBASIC6.14□□□□□ -1.43
SgcaP82350 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SgcaP82350 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SgcaP82350 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SgcaP82350 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SgcaP82350 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
SgcaP82350 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SgcaP82350 Gm7562-201ENSMUST00000210502 2537 ntBASIC6.14□□□□□ -1.43
SgcaP82350 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SgcaP82350 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
SgcaP82350 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SgcaP82350 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SgcaP82350 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SgcaP82350 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SgcaP82350 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SgcaP82350 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.13□□□□□ -1.43
SgcaP82350 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SgcaP82350 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SgcaP82350 Gm12875-201ENSMUST00000118745 344 ntBASIC6.13□□□□□ -1.43
SgcaP82350 Gm15989-201ENSMUST00000121895 498 ntBASIC6.13□□□□□ -1.43
SgcaP82350 Gm15520-201ENSMUST00000132097 1203 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SgcaP82350 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC6.13□□□□□ -1.43
SgcaP82350 Gm13872-203ENSMUST00000147082 657 ntTSL 3 BASIC6.13□□□□□ -1.43
SgcaP82350 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC6.13□□□□□ -1.43
SgcaP82350 Gm16494-201ENSMUST00000165525 261 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SgcaP82350 Arpp19-207ENSMUST00000169188 216 ntTSL 5 BASIC6.13□□□□□ -1.43
SgcaP82350 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SgcaP82350 4921523L03Rik-201ENSMUST00000175729 1186 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SgcaP82350 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SgcaP82350 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC6.13□□□□□ -1.43
SgcaP82350 Gm6100-201ENSMUST00000180253 403 ntBASIC6.13□□□□□ -1.43
SgcaP82350 Tdpoz2-201ENSMUST00000191960 1145 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SgcaP82350 Gm37214-201ENSMUST00000192860 916 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SgcaP82350 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.13□□□□□ -1.43
SgcaP82350 Gm42952-203ENSMUST00000197784 798 ntTSL 3 BASIC6.13□□□□□ -1.43
SgcaP82350 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC6.13□□□□□ -1.43
SgcaP82350 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC6.13□□□□□ -1.43
SgcaP82350 Gm45889-201ENSMUST00000209535 1057 ntBASIC6.13□□□□□ -1.43
SgcaP82350 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC6.13□□□□□ -1.43
SgcaP82350 AC153961.1-201ENSMUST00000217760 385 ntBASIC6.13□□□□□ -1.43
SgcaP82350 Gm18339-201ENSMUST00000218074 888 ntBASIC6.13□□□□□ -1.43
SgcaP82350 Gm9249-201ENSMUST00000221420 578 ntBASIC6.13□□□□□ -1.43
SgcaP82350 Gm18362-201ENSMUST00000221786 529 ntBASIC6.13□□□□□ -1.43
SgcaP82350 Gm36550-201ENSMUST00000221947 416 ntTSL 3 BASIC6.13□□□□□ -1.43
SgcaP82350 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC6.13□□□□□ -1.43
SgcaP82350 Gnpnat1-202ENSMUST00000226276 710 ntBASIC6.13□□□□□ -1.43
SgcaP82350 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SgcaP82350 Mill2-202ENSMUST00000072415 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SgcaP82350 Nme7-201ENSMUST00000086028 834 ntTSL 5 BASIC6.13□□□□□ -1.43
SgcaP82350 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC6.13□□□□□ -1.43
SgcaP82350 AC160863.4-201ENSMUST00000218099 1334 ntTSL 5 BASIC6.13□□□□□ -1.43
SgcaP82350 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SgcaP82350 Gm11853-201ENSMUST00000119687 1384 ntBASIC6.13□□□□□ -1.43
SgcaP82350 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.13□□□□□ -1.43
SgcaP82350 Gm45832-201ENSMUST00000212762 1443 ntBASIC6.13□□□□□ -1.43
SgcaP82350 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC6.13□□□□□ -1.43
SgcaP82350 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SgcaP82350 Tespa1-201ENSMUST00000042586 1663 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SgcaP82350 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SgcaP82350 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SgcaP82350 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
SgcaP82350 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SgcaP82350 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SgcaP82350 Gm42678-201ENSMUST00000197163 2221 ntBASIC6.13□□□□□ -1.43
SgcaP82350 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SgcaP82350 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SgcaP82350 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SgcaP82350 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SgcaP82350 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.12□□□□□ -1.43
SgcaP82350 Gm25501-201ENSMUST00000104429 132 ntBASIC6.12□□□□□ -1.43
SgcaP82350 Gm24472-201ENSMUST00000104484 132 ntBASIC6.12□□□□□ -1.43
SgcaP82350 Spp1-205ENSMUST00000112748 1456 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
SgcaP82350 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
SgcaP82350 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SgcaP82350 Gm5255-201ENSMUST00000120125 642 ntBASIC6.12□□□□□ -1.43
SgcaP82350 Gm13649-201ENSMUST00000122325 606 ntBASIC6.12□□□□□ -1.43
SgcaP82350 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC6.12□□□□□ -1.43
SgcaP82350 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC6.12□□□□□ -1.43
SgcaP82350 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SgcaP82350 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SgcaP82350 Gm12930-201ENSMUST00000146679 676 ntTSL 3 BASIC6.12□□□□□ -1.43
SgcaP82350 Gm22262-201ENSMUST00000158713 86 ntBASIC6.12□□□□□ -1.43
SgcaP82350 Gm17083-201ENSMUST00000165849 1366 ntBASIC6.12□□□□□ -1.43
SgcaP82350 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SgcaP82350 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SgcaP82350 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SgcaP82350 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC6.12□□□□□ -1.43
SgcaP82350 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC6.12□□□□□ -1.43
SgcaP82350 Gm6819-201ENSMUST00000185325 1891 ntBASIC6.12□□□□□ -1.43
SgcaP82350 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SgcaP82350 Mark4-ps-201ENSMUST00000196140 384 ntBASIC6.12□□□□□ -1.43
SgcaP82350 Gm44471-201ENSMUST00000197963 100 ntBASIC6.12□□□□□ -1.43
SgcaP82350 Gm44863-201ENSMUST00000207613 1422 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms