Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Gm11838-201ENSMUST00000121999 231 ntBASIC7.42□□□□□ -1.22
Nup43P59235 Gm16411-201ENSMUST00000122164 1100 ntBASIC7.42□□□□□ -1.22
Nup43P59235 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC7.42□□□□□ -1.22
Nup43P59235 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Nup43P59235 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Nup43P59235 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Nup43P59235 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC7.42□□□□□ -1.22
Nup43P59235 Gm22224-201ENSMUST00000157357 93 ntBASIC7.42□□□□□ -1.22
Nup43P59235 Gm26408-201ENSMUST00000157672 127 ntBASIC7.42□□□□□ -1.22
Nup43P59235 Gm7162-201ENSMUST00000161205 1024 ntBASIC7.42□□□□□ -1.22
Nup43P59235 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nup43P59235 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Nup43P59235 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC7.42□□□□□ -1.22
Nup43P59235 Gm29126-201ENSMUST00000188686 151 ntBASIC7.42□□□□□ -1.22
Nup43P59235 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC7.42□□□□□ -1.22
Nup43P59235 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC7.42□□□□□ -1.22
Nup43P59235 Gm28266-201ENSMUST00000191410 439 ntBASIC7.42□□□□□ -1.22
Nup43P59235 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Nup43P59235 Gm29739-201ENSMUST00000191760 529 ntBASIC7.42□□□□□ -1.22
Nup43P59235 Gm37433-201ENSMUST00000192695 678 ntBASIC7.42□□□□□ -1.22
Nup43P59235 Gm37441-201ENSMUST00000194430 678 ntBASIC7.42□□□□□ -1.22
Nup43P59235 Gm23604-202ENSMUST00000198428 137 ntBASIC7.42□□□□□ -1.22
Nup43P59235 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nup43P59235 Gm44282-201ENSMUST00000203199 190 ntBASIC7.42□□□□□ -1.22
Nup43P59235 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC7.42□□□□□ -1.22
Nup43P59235 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC7.42□□□□□ -1.22
Nup43P59235 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC7.42□□□□□ -1.22
Nup43P59235 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Nup43P59235 Gm33096-201ENSMUST00000210189 493 ntBASIC7.42□□□□□ -1.22
Nup43P59235 Gm45299-201ENSMUST00000210199 420 ntBASIC7.42□□□□□ -1.22
Nup43P59235 Gm45551-201ENSMUST00000211459 928 ntBASIC7.42□□□□□ -1.22
Nup43P59235 AC153561.1-201ENSMUST00000215943 469 ntBASIC7.42□□□□□ -1.22
Nup43P59235 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Nup43P59235 AC122901.2-201ENSMUST00000216926 285 ntBASIC7.42□□□□□ -1.22
Nup43P59235 Gm18629-201ENSMUST00000222496 884 ntBASIC7.42□□□□□ -1.22
Nup43P59235 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC7.42□□□□□ -1.22
Nup43P59235 AC154849.2-201ENSMUST00000223781 974 ntBASIC7.42□□□□□ -1.22
Nup43P59235 Nsa2-203ENSMUST00000225410 974 ntBASIC7.42□□□□□ -1.22
Nup43P59235 AC114008.1-201ENSMUST00000226193 937 ntBASIC7.42□□□□□ -1.22
Nup43P59235 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Nup43P59235 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nup43P59235 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Nup43P59235 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Nup43P59235 AC158686.1-201ENSMUST00000218068 2332 ntBASIC7.42□□□□□ -1.22
Nup43P59235 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nup43P59235 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nup43P59235 Slc16a7-201ENSMUST00000063318 2419 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nup43P59235 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC7.42□□□□□ -1.22
Nup43P59235 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nup43P59235 4933402E13Rik-201ENSMUST00000051414 1970 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nup43P59235 Nprl2-201ENSMUST00000010201 1441 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nup43P59235 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nup43P59235 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Nup43P59235 RMST_1.1-209ENSMUST00000219444 2679 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Nup43P59235 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Nup43P59235 AC126251.1-201ENSMUST00000228170 2707 ntBASIC7.42□□□□□ -1.22
Nup43P59235 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Nup43P59235 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Nup43P59235 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Nup43P59235 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
Nup43P59235 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nup43P59235 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Nup43P59235 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC7.41□□□□□ -1.22
Nup43P59235 Gpr50-201ENSMUST00000070449 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nup43P59235 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Nup43P59235 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nup43P59235 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nup43P59235 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Nup43P59235 Gm10860-201ENSMUST00000176934 1888 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Nup43P59235 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Nup43P59235 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nup43P59235 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nup43P59235 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nup43P59235 Cfl2-201ENSMUST00000078124 2940 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Nup43P59235 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Nup43P59235 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC7.41□□□□□ -1.22
Nup43P59235 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Nup43P59235 Gm12361-201ENSMUST00000119806 1044 ntBASIC7.41□□□□□ -1.22
Nup43P59235 Gm12993-201ENSMUST00000119900 479 ntBASIC7.41□□□□□ -1.22
Nup43P59235 Gm15836-201ENSMUST00000119952 793 ntBASIC7.41□□□□□ -1.22
Nup43P59235 Gm12599-201ENSMUST00000120534 792 ntBASIC7.41□□□□□ -1.22
Nup43P59235 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Nup43P59235 Gm5270-201ENSMUST00000121506 1002 ntBASIC7.41□□□□□ -1.22
Nup43P59235 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC7.41□□□□□ -1.22
Nup43P59235 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC7.41□□□□□ -1.22
Nup43P59235 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC7.41□□□□□ -1.22
Nup43P59235 Gm23533-201ENSMUST00000157540 245 ntBASIC7.41□□□□□ -1.22
Nup43P59235 Gm23663-201ENSMUST00000158045 80 ntBASIC7.41□□□□□ -1.22
Nup43P59235 Gm25413-201ENSMUST00000158544 312 ntBASIC7.41□□□□□ -1.22
Nup43P59235 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC7.41□□□□□ -1.22
Nup43P59235 Gm4246-201ENSMUST00000172822 216 ntBASIC7.41□□□□□ -1.22
Nup43P59235 Gm20627-202ENSMUST00000176275 564 ntTSL 5 BASIC7.41□□□□□ -1.22
Nup43P59235 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC7.41□□□□□ -1.22
Nup43P59235 Gm8167-201ENSMUST00000183320 958 ntBASIC7.41□□□□□ -1.22
Nup43P59235 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Nup43P59235 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Nup43P59235 Gm45458-201ENSMUST00000209900 522 ntBASIC7.41□□□□□ -1.22
Nup43P59235 Thy1-204ENSMUST00000214627 446 ntTSL 3 BASIC7.41□□□□□ -1.22
Nup43P59235 Gm4977-201ENSMUST00000215709 1262 ntBASIC7.41□□□□□ -1.22
Nup43P59235 AC116465.1-201ENSMUST00000220324 235 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms