Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm44896-201ENSMUST00000206190 772 ntBASIC11.15□□□□□ -0.62
Cux1P53564 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC11.15□□□□□ -0.62
Cux1P53564 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cux1P53564 Zfp865-202ENSMUST00000076791 1129 ntBASIC11.15□□□□□ -0.62
Cux1P53564 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Cux1P53564 2900026A02Rik-202ENSMUST00000211733 10238 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Cux1P53564 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cux1P53564 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cux1P53564 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cux1P53564 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC11.15□□□□□ -0.62
Cux1P53564 Gm43331-201ENSMUST00000197991 1689 ntBASIC11.15□□□□□ -0.62
Cux1P53564 Olfr429-202ENSMUST00000216346 2510 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Cux1P53564 Gm43169-201ENSMUST00000199544 4734 ntBASIC11.15□□□□□ -0.62
Cux1P53564 Gm45767-201ENSMUST00000212778 4561 ntBASIC11.15□□□□□ -0.62
Cux1P53564 Mast2-202ENSMUST00000106484 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cux1P53564 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cux1P53564 AC117608.1-201ENSMUST00000225500 3418 ntBASIC11.15□□□□□ -0.62
Cux1P53564 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cux1P53564 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cux1P53564 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cux1P53564 Piwil4-203ENSMUST00000115644 3304 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cux1P53564 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cux1P53564 AC159264.1-202ENSMUST00000224856 3162 ntBASIC11.15□□□□□ -0.63
Cux1P53564 Uhrf1-201ENSMUST00000001258 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Cux1P53564 Eya3-213ENSMUST00000180250 5020 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Cux1P53564 Luzp1-203ENSMUST00000105849 7438 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Cux1P53564 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cux1P53564 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cux1P53564 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cux1P53564 Gm11501-201ENSMUST00000118039 581 ntBASIC11.14□□□□□ -0.63
Cux1P53564 Gm22024-201ENSMUST00000122733 287 ntBASIC11.14□□□□□ -0.63
Cux1P53564 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cux1P53564 Gm23968-201ENSMUST00000175047 125 ntBASIC11.14□□□□□ -0.63
Cux1P53564 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC11.14□□□□□ -0.63
Cux1P53564 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC11.14□□□□□ -0.63
Cux1P53564 Gm6074-201ENSMUST00000193340 451 ntBASIC11.14□□□□□ -0.63
Cux1P53564 Gm44538-201ENSMUST00000205615 348 ntBASIC11.14□□□□□ -0.63
Cux1P53564 AC091237.1-201ENSMUST00000224911 637 ntBASIC11.14□□□□□ -0.63
Cux1P53564 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cux1P53564 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cux1P53564 Gm9874-202ENSMUST00000194957 1464 ntBASIC11.14□□□□□ -0.63
Cux1P53564 Trerf1-205ENSMUST00000190080 7045 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cux1P53564 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cux1P53564 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cux1P53564 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cux1P53564 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cux1P53564 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cux1P53564 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cux1P53564 Zic4-201ENSMUST00000066384 3891 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cux1P53564 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cux1P53564 Gm37161-201ENSMUST00000191994 2697 ntBASIC11.14□□□□□ -0.63
Cux1P53564 Adamtsl1-203ENSMUST00000107178 7839 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Cux1P53564 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cux1P53564 AC161247.1-201ENSMUST00000217744 2295 ntBASIC11.14□□□□□ -0.63
Cux1P53564 Pik3ca-203ENSMUST00000108243 6689 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cux1P53564 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cux1P53564 Cacna1d-202ENSMUST00000112250 8688 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cux1P53564 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cux1P53564 Gm8812-201ENSMUST00000118496 412 ntBASIC11.14□□□□□ -0.63
Cux1P53564 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cux1P53564 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cux1P53564 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cux1P53564 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cux1P53564 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Cux1P53564 Gm43459-201ENSMUST00000202093 331 ntBASIC11.14□□□□□ -0.63
Cux1P53564 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC11.14□□□□□ -0.63
Cux1P53564 CT009495.1-201ENSMUST00000224221 862 ntBASIC11.14□□□□□ -0.63
Cux1P53564 AC124395.1-201ENSMUST00000225940 707 ntBASIC11.14□□□□□ -0.63
Cux1P53564 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Cux1P53564 Mir138-1-201ENSMUST00000083480 99 ntBASIC11.14□□□□□ -0.63
Cux1P53564 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cux1P53564 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Cux1P53564 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Cux1P53564 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cux1P53564 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cux1P53564 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cux1P53564 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cux1P53564 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cux1P53564 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cux1P53564 Gm43335-201ENSMUST00000198299 3276 ntBASIC11.13□□□□□ -0.63
Cux1P53564 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC11.13□□□□□ -0.63
Cux1P53564 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cux1P53564 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC11.13□□□□□ -0.63
Cux1P53564 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cux1P53564 Iars-201ENSMUST00000047363 4396 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Cux1P53564 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC11.13□□□□□ -0.63
Cux1P53564 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Cux1P53564 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC11.13□□□□□ -0.63
Cux1P53564 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cux1P53564 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cux1P53564 Gm23768-201ENSMUST00000104440 131 ntBASIC11.13□□□□□ -0.63
Cux1P53564 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cux1P53564 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC11.13□□□□□ -0.63
Cux1P53564 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cux1P53564 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC11.13□□□□□ -0.63
Cux1P53564 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC11.13□□□□□ -0.63
Cux1P53564 Gm44342-201ENSMUST00000196874 129 ntBASIC11.13□□□□□ -0.63
Cux1P53564 Gm44383-201ENSMUST00000198940 129 ntBASIC11.13□□□□□ -0.63
Cux1P53564 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Cux1P53564 Gm5928-201ENSMUST00000221839 466 ntBASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms