Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC8.2□□□□□ -1.1
Brca1P48754 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Brca1P48754 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Brca1P48754 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Brca1P48754 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Brca1P48754 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
Brca1P48754 Gm16487-201ENSMUST00000105048 4037 ntBASIC8.2□□□□□ -1.1
Brca1P48754 Inpp1-201ENSMUST00000027271 5767 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Brca1P48754 Mir674-201ENSMUST00000102421 100 ntBASIC8.19□□□□□ -1.1
Brca1P48754 Gm23311-201ENSMUST00000104152 134 ntBASIC8.19□□□□□ -1.1
Brca1P48754 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC8.19□□□□□ -1.1
Brca1P48754 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
Brca1P48754 Gm13176-201ENSMUST00000117910 477 ntBASIC8.19□□□□□ -1.1
Brca1P48754 Gm13878-201ENSMUST00000117986 577 ntBASIC8.19□□□□□ -1.1
Brca1P48754 Gm12959-201ENSMUST00000119396 403 ntBASIC8.19□□□□□ -1.1
Brca1P48754 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC8.19□□□□□ -1.1
Brca1P48754 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Brca1P48754 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC8.19□□□□□ -1.1
Brca1P48754 Gm28377-201ENSMUST00000189695 720 ntBASIC8.19□□□□□ -1.1
Brca1P48754 Gm38122-201ENSMUST00000192679 885 ntBASIC8.19□□□□□ -1.1
Brca1P48754 Gm37072-201ENSMUST00000194570 837 ntBASIC8.19□□□□□ -1.1
Brca1P48754 Gm44163-201ENSMUST00000205140 475 ntBASIC8.19□□□□□ -1.1
Brca1P48754 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 Fam102b-201ENSMUST00000046924 5368 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 Paqr8-204ENSMUST00000189400 5330 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 Cttnbp2-201ENSMUST00000090601 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 Gm4767-202ENSMUST00000188096 4725 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 AC132474.1-201ENSMUST00000214407 3686 ntBASIC8.19□□□□□ -1.1
Brca1P48754 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC8.19□□□□□ -1.1
Brca1P48754 Dcp1a-201ENSMUST00000022535 5576 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC8.19□□□□□ -1.1
Brca1P48754 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Brca1P48754 Myom1-201ENSMUST00000024847 5354 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Brca1P48754 Rimbp2-205ENSMUST00000199537 6966 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 Gm43339-201ENSMUST00000200032 1606 ntBASIC8.19□□□□□ -1.1
Brca1P48754 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC8.19□□□□□ -1.1
Brca1P48754 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
Brca1P48754 Ppfia2-201ENSMUST00000029404 5429 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC8.19□□□□□ -1.1
Brca1P48754 Stk36-201ENSMUST00000087183 5245 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Brca1P48754 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC8.19□□□□□ -1.1
Brca1P48754 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 Gm24687-201ENSMUST00000157758 241 ntBASIC8.19□□□□□ -1.1
Brca1P48754 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Brca1P48754 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Brca1P48754 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Brca1P48754 Gm6055-201ENSMUST00000180532 378 ntBASIC8.19□□□□□ -1.1
Brca1P48754 Ass-ps1-201ENSMUST00000197717 761 ntBASIC8.19□□□□□ -1.1
Brca1P48754 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
Brca1P48754 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC8.19□□□□□ -1.1
Brca1P48754 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC8.19□□□□□ -1.1
Brca1P48754 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC8.19□□□□□ -1.1
Brca1P48754 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC8.19□□□□□ -1.1
Brca1P48754 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Brca1P48754 Gm5928-201ENSMUST00000221839 466 ntBASIC8.19□□□□□ -1.1
Brca1P48754 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Brca1P48754 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Brca1P48754 Arnt2-207ENSMUST00000208232 6047 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Brca1P48754 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Brca1P48754 Gm38173-201ENSMUST00000193126 2314 ntBASIC8.19□□□□□ -1.1
Brca1P48754 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Brca1P48754 Syt2-201ENSMUST00000121990 6879 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC8.19□□□□□ -1.1
Brca1P48754 Smc2-201ENSMUST00000102915 5404 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Brca1P48754 AC107763.1-202ENSMUST00000225021 2663 ntBASIC8.18□□□□□ -1.1
Brca1P48754 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Brca1P48754 Gm43612-201ENSMUST00000196087 3207 ntBASIC8.18□□□□□ -1.1
Brca1P48754 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC8.18□□□□□ -1.1
Brca1P48754 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Brca1P48754 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Brca1P48754 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Brca1P48754 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Brca1P48754 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Brca1P48754 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Brca1P48754 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Brca1P48754 Gm38331-201ENSMUST00000195719 2671 ntBASIC8.18□□□□□ -1.1
Brca1P48754 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC8.18□□□□□ -1.1
Brca1P48754 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC8.18□□□□□ -1.1
Brca1P48754 Mtpn-201ENSMUST00000031866 3960 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Brca1P48754 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms