Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox6P40645 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox6P40645 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox6P40645 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Sox6P40645 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox6P40645 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox6P40645 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox6P40645 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.87□□□□□ -1.31
Sox6P40645 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox6P40645 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Sox6P40645 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox6P40645 Gm18451-201ENSMUST00000196759 1719 ntBASIC6.87□□□□□ -1.31
Sox6P40645 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox6P40645 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.87□□□□□ -1.31
Sox6P40645 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox6P40645 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox6P40645 Gm43533-201ENSMUST00000202933 2936 ntBASIC6.87□□□□□ -1.31
Sox6P40645 Gm42885-201ENSMUST00000200763 4214 ntBASIC6.87□□□□□ -1.31
Sox6P40645 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC6.87□□□□□ -1.31
Sox6P40645 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox6P40645 Gm6640-201ENSMUST00000120629 1587 ntBASIC6.86□□□□□ -1.31
Sox6P40645 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox6P40645 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Sox6P40645 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox6P40645 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Sox6P40645 Gm15681-201ENSMUST00000137501 2704 ntBASIC6.86□□□□□ -1.31
Sox6P40645 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox6P40645 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC6.86□□□□□ -1.31
Sox6P40645 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Sox6P40645 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox6P40645 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox6P40645 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Sox6P40645 Gm37278-201ENSMUST00000191619 2872 ntBASIC6.86□□□□□ -1.31
Sox6P40645 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox6P40645 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
Sox6P40645 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC6.86□□□□□ -1.31
Sox6P40645 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Sox6P40645 Gm5228-201ENSMUST00000117186 357 ntBASIC6.86□□□□□ -1.31
Sox6P40645 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox6P40645 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox6P40645 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox6P40645 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Sox6P40645 Gm20491-201ENSMUST00000173765 1241 ntBASIC6.86□□□□□ -1.31
Sox6P40645 Gm24369-201ENSMUST00000175387 96 ntBASIC6.86□□□□□ -1.31
Sox6P40645 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Sox6P40645 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox6P40645 Gm8524-201ENSMUST00000186232 379 ntBASIC6.86□□□□□ -1.31
Sox6P40645 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox6P40645 Gm29562-201ENSMUST00000190113 904 ntBASIC6.86□□□□□ -1.31
Sox6P40645 Gm18699-201ENSMUST00000190713 243 ntBASIC6.86□□□□□ -1.31
Sox6P40645 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC6.86□□□□□ -1.31
Sox6P40645 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Sox6P40645 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Sox6P40645 Gm8616-201ENSMUST00000222175 1037 ntBASIC6.86□□□□□ -1.31
Sox6P40645 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox6P40645 Olfr935-201ENSMUST00000080748 927 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Sox6P40645 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Sox6P40645 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Sox6P40645 Gm44186-201ENSMUST00000204118 2752 ntBASIC6.86□□□□□ -1.31
Sox6P40645 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Sox6P40645 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox6P40645 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox6P40645 Gm28077-201ENSMUST00000190250 1635 ntTSL 5 BASIC6.86□□□□□ -1.31
Sox6P40645 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox6P40645 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox6P40645 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox6P40645 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox6P40645 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox6P40645 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox6P40645 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox6P40645 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox6P40645 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox6P40645 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Sox6P40645 AC166341.5-201ENSMUST00000222206 1400 ntBASIC6.85□□□□□ -1.31
Sox6P40645 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox6P40645 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox6P40645 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Sox6P40645 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Sox6P40645 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Sox6P40645 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Sox6P40645 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Sox6P40645 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Sox6P40645 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Sox6P40645 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Sox6P40645 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
Sox6P40645 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Sox6P40645 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Sox6P40645 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Sox6P40645 Gm11245-201ENSMUST00000119419 1037 ntBASIC6.85□□□□□ -1.31
Sox6P40645 Gm15049-201ENSMUST00000120474 463 ntBASIC6.85□□□□□ -1.31
Sox6P40645 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Sox6P40645 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Sox6P40645 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC6.85□□□□□ -1.31
Sox6P40645 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC6.85□□□□□ -1.31
Sox6P40645 Gm22670-201ENSMUST00000158724 143 ntBASIC6.85□□□□□ -1.31
Sox6P40645 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC6.85□□□□□ -1.31
Sox6P40645 Mir6340-201ENSMUST00000183857 119 ntBASIC6.85□□□□□ -1.31
Sox6P40645 Mir8095-201ENSMUST00000185103 129 ntBASIC6.85□□□□□ -1.31
Sox6P40645 Gm28239-201ENSMUST00000190225 447 ntBASIC6.85□□□□□ -1.31
Sox6P40645 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC6.85□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms