Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm26407-201ENSMUST00000158504 307 ntBASIC5.85□□□□□ -1.47
Sdc1P18828 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sdc1P18828 Ankrd55-204ENSMUST00000168684 1005 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sdc1P18828 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC5.85□□□□□ -1.47
Sdc1P18828 Ing5-203ENSMUST00000190476 918 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Sdc1P18828 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC5.85□□□□□ -1.47
Sdc1P18828 Gm31243-201ENSMUST00000197498 632 ntTSL 2 BASIC5.85□□□□□ -1.47
Sdc1P18828 Kmt5a-212ENSMUST00000198451 1032 ntTSL 3 BASIC5.85□□□□□ -1.47
Sdc1P18828 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC5.85□□□□□ -1.47
Sdc1P18828 Gm42673-201ENSMUST00000202676 337 ntBASIC5.85□□□□□ -1.47
Sdc1P18828 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC5.85□□□□□ -1.47
Sdc1P18828 Gm45399-201ENSMUST00000209955 1016 ntBASIC5.85□□□□□ -1.47
Sdc1P18828 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sdc1P18828 Gm17875-201ENSMUST00000216005 941 ntBASIC5.85□□□□□ -1.47
Sdc1P18828 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC5.85□□□□□ -1.47
Sdc1P18828 AC132446.1-201ENSMUST00000222655 226 ntBASIC5.85□□□□□ -1.47
Sdc1P18828 CT025538.1-201ENSMUST00000223638 369 ntBASIC5.85□□□□□ -1.47
Sdc1P18828 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Sdc1P18828 AC138604.2-201ENSMUST00000226620 921 ntBASIC5.85□□□□□ -1.47
Sdc1P18828 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Sdc1P18828 Cenph-201ENSMUST00000075550 1251 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sdc1P18828 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Sdc1P18828 Gm26130-201ENSMUST00000083171 138 ntBASIC5.85□□□□□ -1.47
Sdc1P18828 Mir25-201ENSMUST00000083460 84 ntBASIC5.85□□□□□ -1.47
Sdc1P18828 Catspere1-201ENSMUST00000194528 2949 ntBASIC5.85□□□□□ -1.47
Sdc1P18828 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sdc1P18828 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sdc1P18828 Gm33167-201ENSMUST00000201933 2643 ntBASIC5.85□□□□□ -1.47
Sdc1P18828 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Sdc1P18828 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
Sdc1P18828 Elavl2-203ENSMUST00000107109 1591 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
Sdc1P18828 Elavl2-205ENSMUST00000107111 1552 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
Sdc1P18828 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC5.84□□□□□ -1.47
Sdc1P18828 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Sdc1P18828 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Sdc1P18828 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sdc1P18828 Gm26705-201ENSMUST00000180761 1457 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sdc1P18828 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sdc1P18828 Sema3d-205ENSMUST00000197927 3207 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sdc1P18828 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sdc1P18828 AC166341.5-201ENSMUST00000222206 1400 ntBASIC5.84□□□□□ -1.47
Sdc1P18828 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sdc1P18828 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC5.84□□□□□ -1.47
Sdc1P18828 Gm38262-201ENSMUST00000194760 1382 ntBASIC5.84□□□□□ -1.47
Sdc1P18828 Pla2g4c-ps-201ENSMUST00000204668 1364 ntBASIC5.84□□□□□ -1.47
Sdc1P18828 Gm37530-201ENSMUST00000191759 4932 ntBASIC5.84□□□□□ -1.47
Sdc1P18828 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Sdc1P18828 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Sdc1P18828 Gm26344-201ENSMUST00000104553 132 ntBASIC5.84□□□□□ -1.47
Sdc1P18828 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Sdc1P18828 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sdc1P18828 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Sdc1P18828 Gm13407-201ENSMUST00000118256 360 ntBASIC5.84□□□□□ -1.47
Sdc1P18828 Gm12993-201ENSMUST00000119900 479 ntBASIC5.84□□□□□ -1.47
Sdc1P18828 Gm11546-201ENSMUST00000120297 354 ntBASIC5.84□□□□□ -1.47
Sdc1P18828 Gm13281-201ENSMUST00000120871 567 ntBASIC5.84□□□□□ -1.47
Sdc1P18828 AA623943-201ENSMUST00000121794 354 ntBASIC5.84□□□□□ -1.47
Sdc1P18828 Gm11686-201ENSMUST00000122397 333 ntBASIC5.84□□□□□ -1.47
Sdc1P18828 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sdc1P18828 Crem-229ENSMUST00000151084 957 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sdc1P18828 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC5.84□□□□□ -1.47
Sdc1P18828 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sdc1P18828 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Sdc1P18828 Gm5611-201ENSMUST00000164523 852 ntBASIC5.84□□□□□ -1.47
Sdc1P18828 Gm23413-201ENSMUST00000175521 125 ntBASIC5.84□□□□□ -1.47
Sdc1P18828 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sdc1P18828 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC5.84□□□□□ -1.47
Sdc1P18828 1190005I06Rik-203ENSMUST00000180677 533 ntAPPRIS ALT2 TSL 3 BASIC5.84□□□□□ -1.47
Sdc1P18828 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sdc1P18828 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC5.84□□□□□ -1.47
Sdc1P18828 Gm28421-201ENSMUST00000186378 356 ntTSL 5 BASIC5.84□□□□□ -1.47
Sdc1P18828 Gm29453-201ENSMUST00000186428 1279 ntBASIC5.84□□□□□ -1.47
Sdc1P18828 Gm28355-201ENSMUST00000187443 356 ntTSL 5 BASIC5.84□□□□□ -1.47
Sdc1P18828 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC5.84□□□□□ -1.47
Sdc1P18828 Gm34217-201ENSMUST00000193562 356 ntTSL 5 BASIC5.84□□□□□ -1.47
Sdc1P18828 Gm17965-201ENSMUST00000193904 517 ntBASIC5.84□□□□□ -1.47
Sdc1P18828 Gm42424-201ENSMUST00000198319 376 ntBASIC5.84□□□□□ -1.47
Sdc1P18828 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC5.84□□□□□ -1.47
Sdc1P18828 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC5.84□□□□□ -1.47
Sdc1P18828 AC118476.4-201ENSMUST00000215385 790 ntTSL 5 BASIC5.84□□□□□ -1.47
Sdc1P18828 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC5.84□□□□□ -1.47
Sdc1P18828 4930473H19Rik-202ENSMUST00000222124 1000 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sdc1P18828 Rpl7a-ps1-201ENSMUST00000223350 793 ntBASIC5.84□□□□□ -1.47
Sdc1P18828 AC132590.1-201ENSMUST00000224374 1164 ntBASIC5.84□□□□□ -1.47
Sdc1P18828 Glycam1-201ENSMUST00000023134 628 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sdc1P18828 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Sdc1P18828 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sdc1P18828 Cbx3-202ENSMUST00000094623 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sdc1P18828 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Sdc1P18828 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Sdc1P18828 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC5.84□□□□□ -1.47
Sdc1P18828 Gm37685-201ENSMUST00000193507 2177 ntBASIC5.84□□□□□ -1.47
Sdc1P18828 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sdc1P18828 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sdc1P18828 Gm43023-201ENSMUST00000197583 2106 ntBASIC5.84□□□□□ -1.47
Sdc1P18828 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC5.84□□□□□ -1.47
Sdc1P18828 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC5.84□□□□□ -1.47
Sdc1P18828 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sdc1P18828 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Sdc1P18828 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms