Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Lire1P11260 Gm28667-201ENSMUST00000189873 2171 ntBASIC7.24□□□□□ -1.25
Lire1P11260 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Lire1P11260 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Lire1P11260 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Lire1P11260 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Lire1P11260 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Lire1P11260 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Lire1P11260 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC7.24□□□□□ -1.25
Lire1P11260 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Lire1P11260 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC7.24□□□□□ -1.25
Lire1P11260 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Lire1P11260 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Lire1P11260 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Lire1P11260 Gm43557-201ENSMUST00000197100 2370 ntBASIC7.24□□□□□ -1.25
Lire1P11260 Gm11870-201ENSMUST00000119255 1322 ntBASIC7.24□□□□□ -1.25
Lire1P11260 AC159624.1-201ENSMUST00000217762 1344 ntBASIC7.24□□□□□ -1.25
Lire1P11260 2700046A07Rik-202ENSMUST00000067450 2101 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Lire1P11260 Zfp68-202ENSMUST00000085852 3318 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Lire1P11260 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Lire1P11260 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Lire1P11260 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Lire1P11260 Gm45221-201ENSMUST00000207822 2272 ntBASIC7.24□□□□□ -1.25
Lire1P11260 Gm11868-201ENSMUST00000121594 1478 ntBASIC7.24□□□□□ -1.25
Lire1P11260 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Lire1P11260 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Lire1P11260 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
Lire1P11260 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Lire1P11260 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
Lire1P11260 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC7.23□□□□□ -1.25
Lire1P11260 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Lire1P11260 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Lire1P11260 Pax9-201ENSMUST00000001538 4166 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Lire1P11260 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Lire1P11260 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Lire1P11260 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Lire1P11260 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC7.23□□□□□ -1.25
Lire1P11260 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Lire1P11260 Gm42972-201ENSMUST00000196937 5617 ntBASIC7.23□□□□□ -1.25
Lire1P11260 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Lire1P11260 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Lire1P11260 Anp32b-ps1-201ENSMUST00000122215 758 ntBASIC7.23□□□□□ -1.25
Lire1P11260 Gm1947-201ENSMUST00000122451 910 ntBASIC7.23□□□□□ -1.25
Lire1P11260 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC7.23□□□□□ -1.25
Lire1P11260 Gm16618-201ENSMUST00000134992 955 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Lire1P11260 Gm13658-201ENSMUST00000135329 929 ntTSL 5 BASIC7.23□□□□□ -1.25
Lire1P11260 Prr13-202ENSMUST00000164688 1020 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Lire1P11260 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC7.23□□□□□ -1.25
Lire1P11260 Obox2-203ENSMUST00000174076 782 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Lire1P11260 Mir5100-201ENSMUST00000174993 64 ntBASIC7.23□□□□□ -1.25
Lire1P11260 1700015G11Rik-201ENSMUST00000180038 397 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Lire1P11260 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Lire1P11260 Mir6999-201ENSMUST00000183498 61 ntBASIC7.23□□□□□ -1.25
Lire1P11260 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC7.23□□□□□ -1.25
Lire1P11260 Gm8304-201ENSMUST00000185744 584 ntBASIC7.23□□□□□ -1.25
Lire1P11260 Gm28728-201ENSMUST00000189087 405 ntBASIC7.23□□□□□ -1.25
Lire1P11260 Gm37306-201ENSMUST00000193447 1233 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Lire1P11260 Gm7430-201ENSMUST00000193824 1144 ntBASIC7.23□□□□□ -1.25
Lire1P11260 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC7.23□□□□□ -1.25
Lire1P11260 Gm44252-201ENSMUST00000204187 330 ntBASIC7.23□□□□□ -1.25
Lire1P11260 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC7.23□□□□□ -1.25
Lire1P11260 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC7.23□□□□□ -1.25
Lire1P11260 Gm6909-201ENSMUST00000209825 989 ntBASIC7.23□□□□□ -1.25
Lire1P11260 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC7.23□□□□□ -1.25
Lire1P11260 Gm32842-201ENSMUST00000212653 738 ntBASIC7.23□□□□□ -1.25
Lire1P11260 Gm8512-201ENSMUST00000215367 471 ntBASIC7.23□□□□□ -1.25
Lire1P11260 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC7.23□□□□□ -1.25
Lire1P11260 AC123061.2-201ENSMUST00000226234 802 ntBASIC7.23□□□□□ -1.25
Lire1P11260 AC163295.2-202ENSMUST00000227763 1053 ntBASIC7.23□□□□□ -1.25
Lire1P11260 AC101831.1-201ENSMUST00000228245 691 ntBASIC7.23□□□□□ -1.25
Lire1P11260 CT009550.3-201ENSMUST00000228542 455 ntBASIC7.23□□□□□ -1.25
Lire1P11260 Sun3-201ENSMUST00000043377 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Lire1P11260 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Lire1P11260 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
Lire1P11260 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Lire1P11260 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Lire1P11260 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Lire1P11260 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Lire1P11260 Prom1-204ENSMUST00000087442 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Lire1P11260 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC7.23□□□□□ -1.25
Lire1P11260 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Lire1P11260 Gria3-209ENSMUST00000165288 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Lire1P11260 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Lire1P11260 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Lire1P11260 Gm20539-201ENSMUST00000174811 1384 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Lire1P11260 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC7.22□□□□□ -1.25
Lire1P11260 Gm38257-201ENSMUST00000195881 2761 ntBASIC7.22□□□□□ -1.25
Lire1P11260 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Lire1P11260 Hao2-201ENSMUST00000029464 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Lire1P11260 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC7.22□□□□□ -1.25
Lire1P11260 Gm7961-201ENSMUST00000201338 1436 ntBASIC7.22□□□□□ -1.25
Lire1P11260 Hmgn2-202ENSMUST00000102552 676 ntAPPRIS P2 TSL 2 BASIC7.22□□□□□ -1.25
Lire1P11260 Mrps18c-202ENSMUST00000112898 460 ntTSL 3 BASIC7.22□□□□□ -1.25
Lire1P11260 Gm15836-201ENSMUST00000119952 793 ntBASIC7.22□□□□□ -1.25
Lire1P11260 Apela-202ENSMUST00000142822 975 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Lire1P11260 Gm26351-201ENSMUST00000157532 232 ntBASIC7.22□□□□□ -1.25
Lire1P11260 Gm22636-201ENSMUST00000158142 275 ntBASIC7.22□□□□□ -1.25
Lire1P11260 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC7.22□□□□□ -1.25
Lire1P11260 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC7.22□□□□□ -1.25
Lire1P11260 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC7.22□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms