Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm25975-201ENSMUST00000158702 125 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm6245-201ENSMUST00000164699 768 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm9844-201ENSMUST00000170837 485 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Hoxd3P09027 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Rnf141-210ENSMUST00000177462 859 ntTSL 5 BASIC6.82□□□□□ -1.32
Hoxd3P09027 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm27013-201ENSMUST00000182441 1024 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Mir7659-201ENSMUST00000184079 58 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm27919-201ENSMUST00000185163 107 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm28542-201ENSMUST00000185545 696 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm28185-201ENSMUST00000186815 694 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm29659-201ENSMUST00000187063 696 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm28682-201ENSMUST00000187430 696 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm28738-201ENSMUST00000187480 696 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm29319-201ENSMUST00000188060 696 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm29312-201ENSMUST00000188724 696 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm29637-201ENSMUST00000188877 696 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm29181-201ENSMUST00000191288 696 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm34144-201ENSMUST00000197039 259 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm43308-201ENSMUST00000197236 373 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm42958-201ENSMUST00000197595 318 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Wars2-205ENSMUST00000198044 403 ntTSL 3 BASIC6.82□□□□□ -1.32
Hoxd3P09027 Mir3107-201ENSMUST00000199351 90 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC6.82□□□□□ -1.32
Hoxd3P09027 Ceacam10-203ENSMUST00000206847 662 ntTSL 2 BASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm44754-201ENSMUST00000208155 400 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC6.82□□□□□ -1.32
Hoxd3P09027 AC116460.1-201ENSMUST00000219040 313 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm18030-201ENSMUST00000222163 731 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC6.82□□□□□ -1.32
Hoxd3P09027 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Timm8b-201ENSMUST00000044051 518 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Prpmp5-201ENSMUST00000048686 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 3110009E18Rik-202ENSMUST00000056038 401 ntTSL 5 BASIC6.82□□□□□ -1.32
Hoxd3P09027 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm9770-201ENSMUST00000075147 811 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Olfr298-201ENSMUST00000077800 999 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Hoxd3P09027 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Hoxd3P09027 Olfr656-201ENSMUST00000098172 991 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
Hoxd3P09027 Olfr1057-201ENSMUST00000099892 948 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Hoxd3P09027 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Hoxd3P09027 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Nos1-202ENSMUST00000102557 4591 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Hoxd3P09027 Eml1-202ENSMUST00000109857 2627 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm19589-201ENSMUST00000189394 2623 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 C78859-201ENSMUST00000212800 5943 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm44531-201ENSMUST00000208364 2000 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Hoxd3P09027 Casp8-203ENSMUST00000190213 1628 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Hoxd3P09027 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm9256-201ENSMUST00000198106 1420 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Slc30a2-202ENSMUST00000105872 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 B230303A05Rik-201ENSMUST00000220672 2706 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 5031434C07Rik-201ENSMUST00000053559 2894 ntTSL 5 BASIC6.82□□□□□ -1.32
Hoxd3P09027 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC6.82□□□□□ -1.32
Hoxd3P09027 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Hoxd3P09027 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Acpp-202ENSMUST00000112590 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Lpar1-202ENSMUST00000107570 3244 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 4930509G22Rik-201ENSMUST00000181206 2481 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Ap5m1-201ENSMUST00000037473 6321 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm33630-201ENSMUST00000223038 2071 ntTSL 5 BASIC6.81□□□□□ -1.32
Hoxd3P09027 Aldoart1-201ENSMUST00000078617 2052 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 Adgrf4-203ENSMUST00000167993 2983 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Ankrd55-201ENSMUST00000022275 2412 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm9430-201ENSMUST00000121232 1527 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 Rtp1-201ENSMUST00000038730 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 9330104G04Rik-201ENSMUST00000181501 2242 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Scmh1-204ENSMUST00000106301 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Teddm2-201ENSMUST00000059607 1654 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
Hoxd3P09027 Klhl28-201ENSMUST00000021331 2024 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Myof-202ENSMUST00000172095 7094 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Hoxd3P09027 B020018J22Rik-201ENSMUST00000223085 3223 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC6.81□□□□□ -1.32
Hoxd3P09027 Polr3f-201ENSMUST00000028914 4403 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Ncald-201ENSMUST00000090150 3733 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Hoxd3P09027 Pde8b-210ENSMUST00000162412 4035 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm43684-201ENSMUST00000199279 6573 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 Nefm-201ENSMUST00000022638 3334 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Reg3a-201ENSMUST00000101272 825 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm23942-201ENSMUST00000101956 107 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm15108-201ENSMUST00000116160 803 ntBASIC6.81□□□□□ -1.32
Hoxd3P09027 Gm14994-201ENSMUST00000117482 1092 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms