Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 1700124L16Rik-203ENSMUST00000190077 1110 ntBASIC5.9□□□□□ -1.46
Hmgb3O54879 Gm35108-201ENSMUST00000194321 699 ntBASIC5.9□□□□□ -1.46
Hmgb3O54879 Gm33191-201ENSMUST00000195604 699 ntBASIC5.9□□□□□ -1.46
Hmgb3O54879 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC5.9□□□□□ -1.46
Hmgb3O54879 Gm42556-201ENSMUST00000201397 607 ntTSL 3 BASIC5.9□□□□□ -1.46
Hmgb3O54879 Gm45255-201ENSMUST00000209943 811 ntBASIC5.9□□□□□ -1.46
Hmgb3O54879 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC5.9□□□□□ -1.46
Hmgb3O54879 Gm4972-201ENSMUST00000211108 1254 ntBASIC5.9□□□□□ -1.46
Hmgb3O54879 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Hmgb3O54879 AC154738.3-201ENSMUST00000227953 409 ntBASIC5.9□□□□□ -1.46
Hmgb3O54879 Thyn1-201ENSMUST00000039161 918 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Hmgb3O54879 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Hmgb3O54879 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Hmgb3O54879 Dppa5a-201ENSMUST00000071991 619 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Hmgb3O54879 Gm4956-201ENSMUST00000082032 1148 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Hmgb3O54879 Olfr1280-201ENSMUST00000082167 1003 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Hmgb3O54879 Gm10029-201ENSMUST00000089635 330 ntBASIC5.9□□□□□ -1.46
Hmgb3O54879 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Hmgb3O54879 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Hmgb3O54879 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC5.9□□□□□ -1.47
Hmgb3O54879 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Hmgb3O54879 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.47
Hmgb3O54879 Gm40778-201ENSMUST00000217825 1344 ntBASIC5.9□□□□□ -1.47
Hmgb3O54879 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Hmgb3O54879 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
Hmgb3O54879 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Hmgb3O54879 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC5.9□□□□□ -1.47
Hmgb3O54879 9530052C20Rik-201ENSMUST00000181882 1372 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Hmgb3O54879 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC5.9□□□□□ -1.47
Hmgb3O54879 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Hmgb3O54879 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Hmgb3O54879 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Hmgb3O54879 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Hmgb3O54879 Gm38380-201ENSMUST00000195718 2248 ntBASIC5.9□□□□□ -1.47
Hmgb3O54879 Gc-201ENSMUST00000049209 1801 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Hmgb3O54879 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC5.9□□□□□ -1.47
Hmgb3O54879 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Hmgb3O54879 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Hmgb3O54879 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Hmgb3O54879 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Hmgb3O54879 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Hmgb3O54879 AC111010.1-203ENSMUST00000227287 1548 ntBASIC5.89□□□□□ -1.47
Hmgb3O54879 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hmgb3O54879 Gm6640-201ENSMUST00000120629 1587 ntBASIC5.89□□□□□ -1.47
Hmgb3O54879 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hmgb3O54879 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hmgb3O54879 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hmgb3O54879 Gm36933-201ENSMUST00000194945 3071 ntBASIC5.89□□□□□ -1.47
Hmgb3O54879 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
Hmgb3O54879 Mir181d-201ENSMUST00000102383 72 ntBASIC5.89□□□□□ -1.47
Hmgb3O54879 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Hmgb3O54879 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Hmgb3O54879 Gm12883-201ENSMUST00000117867 364 ntBASIC5.89□□□□□ -1.47
Hmgb3O54879 Gm11245-201ENSMUST00000119419 1037 ntBASIC5.89□□□□□ -1.47
Hmgb3O54879 Gm5255-201ENSMUST00000120125 642 ntBASIC5.89□□□□□ -1.47
Hmgb3O54879 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC5.89□□□□□ -1.47
Hmgb3O54879 Gm11343-201ENSMUST00000120579 599 ntBASIC5.89□□□□□ -1.47
Hmgb3O54879 Gm14010-201ENSMUST00000131961 374 ntTSL 2 BASIC5.89□□□□□ -1.47
Hmgb3O54879 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hmgb3O54879 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hmgb3O54879 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hmgb3O54879 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hmgb3O54879 Mir1983-201ENSMUST00000157523 132 ntBASIC5.89□□□□□ -1.47
Hmgb3O54879 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hmgb3O54879 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hmgb3O54879 Gm16494-201ENSMUST00000165525 261 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Hmgb3O54879 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Hmgb3O54879 Gm20406-201ENSMUST00000173993 423 ntTSL 3 BASIC5.89□□□□□ -1.47
Hmgb3O54879 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Hmgb3O54879 Gm8529-201ENSMUST00000183298 745 ntBASIC5.89□□□□□ -1.47
Hmgb3O54879 Scgb2b30-201ENSMUST00000187013 336 ntBASIC5.89□□□□□ -1.47
Hmgb3O54879 Scgb2b10-201ENSMUST00000191403 318 ntBASIC5.89□□□□□ -1.47
Hmgb3O54879 Gm37349-201ENSMUST00000194205 624 ntBASIC5.89□□□□□ -1.47
Hmgb3O54879 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Hmgb3O54879 1700008B11Rik-201ENSMUST00000198145 634 ntBASIC5.89□□□□□ -1.47
Hmgb3O54879 Gm42424-201ENSMUST00000198319 376 ntBASIC5.89□□□□□ -1.47
Hmgb3O54879 Gm6312-201ENSMUST00000204060 1194 ntBASIC5.89□□□□□ -1.47
Hmgb3O54879 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC5.89□□□□□ -1.47
Hmgb3O54879 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC5.89□□□□□ -1.47
Hmgb3O54879 Gm4536-201ENSMUST00000209157 542 ntBASIC5.89□□□□□ -1.47
Hmgb3O54879 Gm34006-201ENSMUST00000213985 655 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hmgb3O54879 Gm19228-201ENSMUST00000214030 717 ntBASIC5.89□□□□□ -1.47
Hmgb3O54879 AC142407.1-201ENSMUST00000214371 494 ntTSL 5 BASIC5.89□□□□□ -1.47
Hmgb3O54879 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC5.89□□□□□ -1.47
Hmgb3O54879 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC5.89□□□□□ -1.47
Hmgb3O54879 AC112259.1-201ENSMUST00000222891 853 ntTSL 2 BASIC5.89□□□□□ -1.47
Hmgb3O54879 Zfp389-202ENSMUST00000224437 1234 ntBASIC5.89□□□□□ -1.47
Hmgb3O54879 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hmgb3O54879 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Hmgb3O54879 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hmgb3O54879 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hmgb3O54879 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hmgb3O54879 Plac8-202ENSMUST00000097437 738 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Hmgb3O54879 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hmgb3O54879 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hmgb3O54879 Gm38276-201ENSMUST00000192446 1343 ntBASIC5.89□□□□□ -1.47
Hmgb3O54879 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hmgb3O54879 Dpep2-202ENSMUST00000117555 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Hmgb3O54879 1700095J07Rik-201ENSMUST00000128017 1405 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Hmgb3O54879 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms