Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Acly-207ENSMUST00000165111 4162 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Gm37943-201ENSMUST00000194053 3944 ntBASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Nrp2-205ENSMUST00000114155 6534 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Gm7494-201ENSMUST00000121248 441 ntBASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Gm4751-201ENSMUST00000200620 1105 ntBASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Gm43772-201ENSMUST00000202052 379 ntBASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Gm4808-201ENSMUST00000222283 1203 ntBASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 AC154323.2-201ENSMUST00000226557 1151 ntBASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Gm43864-201ENSMUST00000204452 4028 ntBASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Mkrn2-201ENSMUST00000000449 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 Gm2762-207ENSMUST00000202739 2665 ntBASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 Gm37806-201ENSMUST00000194524 6387 ntBASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 Gm15575-201ENSMUST00000119414 1581 ntBASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 Dlk1-206ENSMUST00000109846 4106 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 Adgrl3-208ENSMUST00000118442 5101 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 Tbx22-203ENSMUST00000168174 5217 ntAPPRIS P4 TSL 2 BASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 Gm15681-201ENSMUST00000137501 2704 ntBASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 AC155234.1-201ENSMUST00000225610 2823 ntBASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 Mir674-201ENSMUST00000102421 100 ntBASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 Gm25178-201ENSMUST00000122633 325 ntBASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 Gm2709-201ENSMUST00000142979 350 ntBASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 Mir1929-201ENSMUST00000158635 93 ntBASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 Gm37620-201ENSMUST00000192910 501 ntBASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 AC133203.1-201ENSMUST00000228241 301 ntBASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 Gm37648-201ENSMUST00000192072 2563 ntBASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 Gm37069-201ENSMUST00000192742 4142 ntBASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ccdc180J3QNE4 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Ablim1-203ENSMUST00000104902 5907 ntTSL 5 BASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Gm17841-201ENSMUST00000210711 2425 ntBASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Ccdc180-204ENSMUST00000178561 5081 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Gm22438-201ENSMUST00000104049 132 ntBASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Gm26416-201ENSMUST00000104280 134 ntBASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Gm2178-201ENSMUST00000104927 357 ntBASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Gm14864-201ENSMUST00000116164 1087 ntBASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Gm13878-201ENSMUST00000117986 577 ntBASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Gm8168-201ENSMUST00000209631 948 ntBASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Gm29486-201ENSMUST00000088648 372 ntBASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Zfp229-201ENSMUST00000065871 4525 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Gm43637-201ENSMUST00000202206 2926 ntBASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 C87436-203ENSMUST00000113700 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Gm6679-201ENSMUST00000191467 1869 ntBASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Gm43331-201ENSMUST00000197991 1689 ntBASIC13.29□□□□□ -0.28
Ccdc180J3QNE4 Smcr8-202ENSMUST00000102667 3544 ntBASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Gm13141-201ENSMUST00000117417 456 ntBASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Gm8662-201ENSMUST00000118644 574 ntBASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Mir6989-201ENSMUST00000184812 65 ntBASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Gm42708-201ENSMUST00000196332 905 ntBASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 AC121997.2-202ENSMUST00000227158 939 ntBASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Ints2-201ENSMUST00000018212 5906 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Sema5a-201ENSMUST00000067458 10809 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc180J3QNE4 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms