Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Chmp2aQ9DB34 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Gm13821-201ENSMUST00000202029 3201 ntBASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 AC125409.2-201ENSMUST00000221888 2158 ntBASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Gm25614-201ENSMUST00000104013 133 ntBASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Gm22470-201ENSMUST00000104117 130 ntBASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Gm23027-201ENSMUST00000158771 158 ntBASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Gm4605-201ENSMUST00000203148 625 ntBASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Gm18690-201ENSMUST00000204488 985 ntBASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Gcnt2-204ENSMUST00000223570 335 ntBASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Gm6866-201ENSMUST00000188559 2549 ntBASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
Chmp2aQ9DB34 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Gm18632-201ENSMUST00000222597 2087 ntBASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Gm42996-201ENSMUST00000196116 1636 ntBASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Gm13414-201ENSMUST00000117516 727 ntBASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Gm11865-201ENSMUST00000118093 859 ntBASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Gm14465-201ENSMUST00000120603 567 ntBASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Gm15644-201ENSMUST00000121764 387 ntBASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Mir3078-201ENSMUST00000175231 87 ntBASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Gm27218-201ENSMUST00000183745 392 ntBASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Gm28573-201ENSMUST00000187821 380 ntBASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Gm28145-201ENSMUST00000189742 380 ntBASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Gm28400-201ENSMUST00000191332 380 ntBASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Gm38328-201ENSMUST00000195582 317 ntBASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Gm18562-201ENSMUST00000209949 915 ntBASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Diaph3-204ENSMUST00000226254 682 ntBASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 CT009515.1-201ENSMUST00000228127 586 ntBASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Gm18908-201ENSMUST00000207125 1483 ntBASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC7.61□□□□□ -1.19
Chmp2aQ9DB34 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Chmp2aQ9DB34 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Chmp2aQ9DB34 Gm37364-201ENSMUST00000192533 3920 ntBASIC7.6□□□□□ -1.19
Chmp2aQ9DB34 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC7.6□□□□□ -1.19
Chmp2aQ9DB34 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Chmp2aQ9DB34 Gm37067-201ENSMUST00000195730 1628 ntBASIC7.6□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 116.8 ms