Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Olfr1303-201ENSMUST00000099609 939 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Gm16701-201ENSMUST00000181309 1627 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Gm33533-201ENSMUST00000193853 1633 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Nxpe4-202ENSMUST00000215780 2875 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Ddx47-201ENSMUST00000032326 1764 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Morf4l2-214ENSMUST00000166930 1926 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Trim42Q9D2H5 Gm19031-201ENSMUST00000176280 1365 ntBASIC8.09□□□□□ -1.12
Trim42Q9D2H5 Kbtbd3-201ENSMUST00000049648 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Trim42Q9D2H5 Gm38947-201ENSMUST00000209940 2720 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Trim42Q9D2H5 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 CT025600.1-202ENSMUST00000220264 2510 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm44001-201ENSMUST00000203158 3773 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Olfr704-201ENSMUST00000080925 2124 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Hbq1b-201ENSMUST00000101387 562 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm22268-201ENSMUST00000104009 131 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Parp11-204ENSMUST00000112195 733 ntTSL 3 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm14932-201ENSMUST00000117112 453 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Glns-ps1-201ENSMUST00000120291 1118 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm14407-201ENSMUST00000121260 447 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm13218-201ENSMUST00000128180 265 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm12055-201ENSMUST00000143643 793 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 BC048671-202ENSMUST00000167550 890 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Dcpp2-202ENSMUST00000168272 589 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Pax4-205ENSMUST00000174194 974 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm5977-201ENSMUST00000174304 573 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm8993-201ENSMUST00000182182 983 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm29474-201ENSMUST00000187688 379 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm28396-201ENSMUST00000190309 379 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Ighv1-8-201ENSMUST00000192236 293 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm6522-201ENSMUST00000197160 1203 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm18452-201ENSMUST00000202968 1111 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Rpl18a-ps4-201ENSMUST00000206176 536 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 4933432K03Rik-202ENSMUST00000206244 765 ntTSL 3 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm29725-201ENSMUST00000206614 407 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm32916-201ENSMUST00000207884 935 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm44862-201ENSMUST00000207981 1055 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm44561-201ENSMUST00000208869 264 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm43154-209ENSMUST00000209659 1165 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 AC164614.1-201ENSMUST00000216038 397 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm5080-201ENSMUST00000220341 743 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 AC166358.1-201ENSMUST00000220677 105 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 AC153662.2-201ENSMUST00000221097 120 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 AC156037.2-201ENSMUST00000221284 112 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 AC166341.6-201ENSMUST00000221528 105 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 CT030242.1-201ENSMUST00000221945 125 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 AC124772.2-201ENSMUST00000222049 154 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 AC153663.1-201ENSMUST00000222165 120 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 CT030157.1-201ENSMUST00000222355 148 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 AC150661.2-201ENSMUST00000222418 105 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 AC127242.2-201ENSMUST00000223138 148 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm6187-201ENSMUST00000040649 960 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm10689-201ENSMUST00000098864 432 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Lonp2-202ENSMUST00000121673 1550 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Skap2-201ENSMUST00000078214 1583 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm14976-201ENSMUST00000117055 1394 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm34294-201ENSMUST00000191912 4263 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Paip1-202ENSMUST00000109203 1525 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Dcstamp-205ENSMUST00000228556 1684 ntBASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC8.08□□□□□ -1.12
Trim42Q9D2H5 Nrg4-213ENSMUST00000164721 1927 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Trim42Q9D2H5 Gm6545-201ENSMUST00000217186 1786 ntBASIC8.07□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms