Protein–RNA interactions for Protein: Q9D024

Ccdc47, Coiled-coil domain-containing protein 47, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47Q9D024 Gm18562-201ENSMUST00000209949 915 ntBASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 AC157571.1-201ENSMUST00000222014 520 ntBASIC8.63□□□□□ -1.03
Ccdc47Q9D024 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Gm17199-201ENSMUST00000097296 416 ntBASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Gm18537-202ENSMUST00000206215 1503 ntBASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Ccdc47Q9D024 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Gm38262-201ENSMUST00000194760 1382 ntBASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Gm45537-201ENSMUST00000211539 2708 ntBASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Gm11928-201ENSMUST00000119323 437 ntBASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Gm12297-201ENSMUST00000121380 979 ntBASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Gm22795-201ENSMUST00000157233 118 ntBASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Gm17973-201ENSMUST00000174509 520 ntBASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Mir6940-201ENSMUST00000183447 70 ntBASIC8.62□□□□□ -1.03
Ccdc47Q9D024 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Gm18349-201ENSMUST00000187440 904 ntBASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Gm37225-201ENSMUST00000193423 325 ntBASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC8.62□□□□□ -1.03
Ccdc47Q9D024 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 AC159205.1-201ENSMUST00000225513 1099 ntBASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Gm6807-201ENSMUST00000077435 888 ntBASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 CT010514.1-201ENSMUST00000214088 2969 ntBASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ccdc47Q9D024 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc47Q9D024 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Ccdc47Q9D024 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc47Q9D024 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc47Q9D024 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc47Q9D024 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc47Q9D024 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc47Q9D024 Gm13313-201ENSMUST00000118938 1084 ntBASIC8.61□□□□□ -1.03
Ccdc47Q9D024 Gm5255-201ENSMUST00000120125 642 ntBASIC8.61□□□□□ -1.03
Ccdc47Q9D024 Gm13282-201ENSMUST00000121577 545 ntBASIC8.61□□□□□ -1.03
Ccdc47Q9D024 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC8.61□□□□□ -1.03
Ccdc47Q9D024 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC8.61□□□□□ -1.03
Ccdc47Q9D024 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC8.61□□□□□ -1.03
Ccdc47Q9D024 Gm7707-201ENSMUST00000165950 1156 ntBASIC8.61□□□□□ -1.03
Ccdc47Q9D024 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC8.61□□□□□ -1.03
Ccdc47Q9D024 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc47Q9D024 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc47Q9D024 Gm5181-201ENSMUST00000183140 971 ntBASIC8.61□□□□□ -1.03
Ccdc47Q9D024 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc47Q9D024 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc47Q9D024 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC8.61□□□□□ -1.03
Ccdc47Q9D024 AC154461.4-201ENSMUST00000224878 468 ntBASIC8.61□□□□□ -1.03
Ccdc47Q9D024 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
Ccdc47Q9D024 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Ccdc47Q9D024 Snora9-201ENSMUST00000082579 133 ntBASIC8.61□□□□□ -1.03
Ccdc47Q9D024 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC8.61□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 149 ms