Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 AC135119.1-202ENSMUST00000228435 2203 ntBASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Gm37420-201ENSMUST00000195332 2912 ntBASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Gm10601-201ENSMUST00000120436 1422 ntBASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Gm25396-201ENSMUST00000103981 133 ntBASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Gm6877-201ENSMUST00000119347 1101 ntBASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Gm12459-201ENSMUST00000120659 356 ntBASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Gm4887-201ENSMUST00000122230 1053 ntBASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Gm22025-201ENSMUST00000122734 302 ntBASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Gm18765-201ENSMUST00000203166 660 ntBASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Gm29759-201ENSMUST00000205860 327 ntBASIC8.66□□□□□ -1.02
Nup88Q8CEC0 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 AC132446.1-201ENSMUST00000222655 226 ntBASIC8.66□□□□□ -1.02
Nup88Q8CEC0 AL590616.1-201ENSMUST00000223339 574 ntBASIC8.66□□□□□ -1.02
Nup88Q8CEC0 AC166822.1-201ENSMUST00000227667 636 ntBASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Gm25926-201ENSMUST00000082899 160 ntBASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Nup88Q8CEC0 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Gm42595-201ENSMUST00000196771 1607 ntBASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Gm15109-201ENSMUST00000133085 2026 ntBASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Serpina3h-202ENSMUST00000116393 1226 ntBASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Gm6181-201ENSMUST00000117187 264 ntBASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Gm14891-201ENSMUST00000117378 596 ntBASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Gm14380-201ENSMUST00000122298 431 ntBASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Gm28142-201ENSMUST00000186899 698 ntBASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Gm20223-201ENSMUST00000199932 805 ntBASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC8.65□□□□□ -1.02
Nup88Q8CEC0 AC133598.2-201ENSMUST00000224302 624 ntBASIC8.65□□□□□ -1.02
Nup88Q8CEC0 AC154692.1-202ENSMUST00000226632 1231 ntBASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Gm6101-201ENSMUST00000195384 1867 ntBASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Nup88Q8CEC0 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC8.65□□□□□ -1.03
Nup88Q8CEC0 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
Nup88Q8CEC0 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC8.65□□□□□ -1.03
Nup88Q8CEC0 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Nup88Q8CEC0 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Nup88Q8CEC0 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Nup88Q8CEC0 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Nup88Q8CEC0 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Nup88Q8CEC0 Gm42898-201ENSMUST00000200370 3073 ntBASIC8.65□□□□□ -1.03
Nup88Q8CEC0 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms