Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Vps53Q8CCB4 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Gm43769-201ENSMUST00000201871 4323 ntBASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Gm38302-201ENSMUST00000191676 2076 ntBASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Olfr1432-202ENSMUST00000207710 2068 ntAPPRIS P5 TSL 5 BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Gm43571-201ENSMUST00000200067 3098 ntBASIC8.66□□□□□ -1.02
Vps53Q8CCB4 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Gm12601-201ENSMUST00000118994 846 ntBASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Gm14826-201ENSMUST00000121284 901 ntBASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Gm12634-201ENSMUST00000122157 992 ntBASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Gm23762-201ENSMUST00000158348 106 ntBASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Gm24824-201ENSMUST00000175097 78 ntBASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Gm9249-201ENSMUST00000221420 578 ntBASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Mir138-2-201ENSMUST00000083578 71 ntBASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Gm28906-201ENSMUST00000191371 1779 ntBASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Vps53Q8CCB4 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Gm42771-201ENSMUST00000198342 2486 ntBASIC8.65□□□□□ -1.02
Vps53Q8CCB4 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Gm4887-201ENSMUST00000122230 1053 ntBASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Gm16580-201ENSMUST00000162696 1044 ntBASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Gm20111-201ENSMUST00000184830 319 ntBASIC8.65□□□□□ -1.02
Vps53Q8CCB4 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 AC124510.2-201ENSMUST00000221958 683 ntBASIC8.65□□□□□ -1.02
Vps53Q8CCB4 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 AC157572.1-201ENSMUST00000227187 825 ntBASIC8.65□□□□□ -1.02
Vps53Q8CCB4 AC125539.1-201ENSMUST00000227423 622 ntBASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Gm25926-201ENSMUST00000082899 160 ntBASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC8.65□□□□□ -1.02
Vps53Q8CCB4 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC8.65□□□□□ -1.03
Vps53Q8CCB4 CT025535.2-201ENSMUST00000228572 7441 ntBASIC8.65□□□□□ -1.03
Vps53Q8CCB4 Gm37274-201ENSMUST00000192167 1682 ntBASIC8.65□□□□□ -1.03
Vps53Q8CCB4 Gm37163-201ENSMUST00000195439 1690 ntBASIC8.65□□□□□ -1.03
Vps53Q8CCB4 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Vps53Q8CCB4 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
Vps53Q8CCB4 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Gm38218-201ENSMUST00000193555 4689 ntBASIC8.64□□□□□ -1.03
Vps53Q8CCB4 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Gm42514-201ENSMUST00000196636 1832 ntBASIC8.64□□□□□ -1.03
Vps53Q8CCB4 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 133.8 ms