Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm18848-201ENSMUST00000182069 792 ntBASIC6.74□□□□□ -1.33
Col8a1Q00780 Gm27468-201ENSMUST00000183577 106 ntBASIC6.74□□□□□ -1.33
Col8a1Q00780 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col8a1Q00780 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC6.74□□□□□ -1.33
Col8a1Q00780 Gm31123-201ENSMUST00000192094 666 ntBASIC6.74□□□□□ -1.33
Col8a1Q00780 Gm32569-201ENSMUST00000193955 604 ntTSL 2 BASIC6.74□□□□□ -1.33
Col8a1Q00780 Gm37841-201ENSMUST00000195367 376 ntBASIC6.74□□□□□ -1.33
Col8a1Q00780 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col8a1Q00780 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.74□□□□□ -1.33
Col8a1Q00780 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC6.74□□□□□ -1.33
Col8a1Q00780 Gm8637-201ENSMUST00000212919 1085 ntBASIC6.74□□□□□ -1.33
Col8a1Q00780 AC109214.2-201ENSMUST00000220089 358 ntBASIC6.74□□□□□ -1.33
Col8a1Q00780 Gm9249-201ENSMUST00000221420 578 ntBASIC6.74□□□□□ -1.33
Col8a1Q00780 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col8a1Q00780 AC117949.1-201ENSMUST00000225547 419 ntBASIC6.74□□□□□ -1.33
Col8a1Q00780 AC132833.3-201ENSMUST00000227472 866 ntBASIC6.74□□□□□ -1.33
Col8a1Q00780 AC140451.1-201ENSMUST00000227984 737 ntBASIC6.74□□□□□ -1.33
Col8a1Q00780 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col8a1Q00780 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Col8a1Q00780 Mir7b-201ENSMUST00000083557 111 ntBASIC6.74□□□□□ -1.33
Col8a1Q00780 Gm23058-201ENSMUST00000093703 107 ntBASIC6.74□□□□□ -1.33
Col8a1Q00780 Olfr1331-201ENSMUST00000094831 954 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
Col8a1Q00780 Dnajc6-203ENSMUST00000106929 5128 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col8a1Q00780 Slc2a9-203ENSMUST00000067886 3602 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col8a1Q00780 Txnip-202ENSMUST00000074519 2827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col8a1Q00780 Gm3269-201ENSMUST00000166025 1758 ntAPPRIS P5 TSL 5 BASIC6.74□□□□□ -1.33
Col8a1Q00780 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col8a1Q00780 AC153862.1-201ENSMUST00000215700 3349 ntBASIC6.74□□□□□ -1.33
Col8a1Q00780 Tfpi-206ENSMUST00000111718 2027 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
Col8a1Q00780 Zfp74-201ENSMUST00000032797 2040 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Col8a1Q00780 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col8a1Q00780 Psg16-201ENSMUST00000071399 4421 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col8a1Q00780 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Col8a1Q00780 Sp100-210ENSMUST00000147552 1597 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col8a1Q00780 Zfp791-201ENSMUST00000098550 1587 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col8a1Q00780 Gata4-203ENSMUST00000121312 2407 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col8a1Q00780 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 Gfpt2-201ENSMUST00000020629 2947 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 Zfp354a-203ENSMUST00000109119 2078 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm42549-201ENSMUST00000202392 7004 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Pkd2l2-201ENSMUST00000014647 2461 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC6.73□□□□□ -1.33
Col8a1Q00780 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 Magea5-201ENSMUST00000069556 1360 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Col8a1Q00780 Vps8-203ENSMUST00000115397 5032 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Col8a1Q00780 Grip1-207ENSMUST00000130387 2780 ntTSL 5 BASIC6.73□□□□□ -1.33
Col8a1Q00780 Brinp3-205ENSMUST00000166814 2760 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 Zfp940-201ENSMUST00000085792 2764 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 Vipas39-201ENSMUST00000021426 2509 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm25344-201ENSMUST00000104503 132 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
Col8a1Q00780 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC6.73□□□□□ -1.33
Col8a1Q00780 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Col8a1Q00780 Zfp467-207ENSMUST00000114563 463 ntTSL 5 BASIC6.73□□□□□ -1.33
Col8a1Q00780 Foxp3-204ENSMUST00000115740 3832 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm6491-201ENSMUST00000118273 990 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm14528-201ENSMUST00000120615 231 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm12202-201ENSMUST00000121196 811 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm12632-201ENSMUST00000121223 495 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm14328-201ENSMUST00000122178 408 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm22275-201ENSMUST00000122470 310 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm12055-201ENSMUST00000143643 793 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm15795-201ENSMUST00000160969 553 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm18358-201ENSMUST00000173179 1277 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC6.73□□□□□ -1.33
Col8a1Q00780 n-R5s115-201ENSMUST00000179019 119 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm8604-201ENSMUST00000183150 965 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm27595-201ENSMUST00000184579 112 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm5835-201ENSMUST00000185806 1270 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC6.73□□□□□ -1.33
Col8a1Q00780 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm37727-201ENSMUST00000191637 819 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm38203-201ENSMUST00000191815 245 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm17979-201ENSMUST00000196646 611 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm42605-201ENSMUST00000199565 385 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm44162-201ENSMUST00000203543 544 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm44267-201ENSMUST00000204132 385 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm18840-201ENSMUST00000204553 506 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm44603-201ENSMUST00000206820 367 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm7419-201ENSMUST00000209962 925 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Col8a1Q00780 Gm4800-201ENSMUST00000215776 1266 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 AC151904.5-201ENSMUST00000218975 549 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 AC192334.3-201ENSMUST00000221828 569 ntTSL 5 BASIC6.73□□□□□ -1.33
Col8a1Q00780 Vmn1r41-204ENSMUST00000227039 985 ntBASIC6.73□□□□□ -1.33
Col8a1Q00780 Guca2a-201ENSMUST00000024015 594 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 Olfr449-201ENSMUST00000050729 1037 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Col8a1Q00780 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col8a1Q00780 Olfr980-201ENSMUST00000073932 933 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Col8a1Q00780 n-R5s193-201ENSMUST00000082864 109 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms