Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Msh6P54276 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Msh6P54276 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Msh6P54276 AC154270.2-201ENSMUST00000226755 2306 ntBASIC9.34□□□□□ -0.91
Msh6P54276 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Msh6P54276 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Msh6P54276 Gm18726-201ENSMUST00000218175 2010 ntBASIC9.34□□□□□ -0.91
Msh6P54276 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
Msh6P54276 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Msh6P54276 Gm12608-201ENSMUST00000122013 1715 ntBASIC9.33□□□□□ -0.92
Msh6P54276 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Msh6P54276 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Msh6P54276 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Msh6P54276 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC9.33□□□□□ -0.92
Msh6P54276 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Msh6P54276 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Msh6P54276 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Msh6P54276 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Msh6P54276 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Msh6P54276 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.92
Msh6P54276 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Msh6P54276 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Msh6P54276 Abhd2-201ENSMUST00000037315 6877 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Msh6P54276 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Msh6P54276 Gm12879-201ENSMUST00000120003 1182 ntBASIC9.33□□□□□ -0.92
Msh6P54276 Gm11343-201ENSMUST00000120579 599 ntBASIC9.33□□□□□ -0.92
Msh6P54276 Gm5843-201ENSMUST00000121631 476 ntBASIC9.33□□□□□ -0.92
Msh6P54276 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC9.33□□□□□ -0.92
Msh6P54276 AC079644.2-201ENSMUST00000220581 322 ntBASIC9.33□□□□□ -0.92
Msh6P54276 AC114008.1-201ENSMUST00000226193 937 ntBASIC9.33□□□□□ -0.92
Msh6P54276 AC122309.1-201ENSMUST00000226945 421 ntBASIC9.33□□□□□ -0.92
Msh6P54276 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Msh6P54276 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Msh6P54276 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Msh6P54276 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Msh6P54276 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Msh6P54276 Ctnnd1-219ENSMUST00000111693 6255 ntAPPRIS ALT1 TSL 5 BASIC9.33□□□□□ -0.92
Msh6P54276 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Msh6P54276 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Msh6P54276 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Msh6P54276 Gm43331-201ENSMUST00000197991 1689 ntBASIC9.32□□□□□ -0.92
Msh6P54276 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Msh6P54276 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Msh6P54276 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Msh6P54276 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Msh6P54276 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC9.32□□□□□ -0.92
Msh6P54276 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC9.32□□□□□ -0.92
Msh6P54276 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Msh6P54276 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Msh6P54276 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Msh6P54276 Muc6-201ENSMUST00000062451 8650 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Msh6P54276 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Msh6P54276 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Msh6P54276 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Msh6P54276 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Msh6P54276 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Msh6P54276 Gm12944-201ENSMUST00000119262 463 ntBASIC9.32□□□□□ -0.92
Msh6P54276 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC9.32□□□□□ -0.92
Msh6P54276 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Msh6P54276 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Msh6P54276 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC9.32□□□□□ -0.92
Msh6P54276 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC9.32□□□□□ -0.92
Msh6P54276 Gm29354-201ENSMUST00000187613 696 ntBASIC9.32□□□□□ -0.92
Msh6P54276 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Msh6P54276 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Msh6P54276 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC9.32□□□□□ -0.92
Msh6P54276 Gm8101-201ENSMUST00000192796 478 ntBASIC9.32□□□□□ -0.92
Msh6P54276 Gm20128-201ENSMUST00000196189 417 ntBASIC9.32□□□□□ -0.92
Msh6P54276 Gm45432-201ENSMUST00000210391 416 ntBASIC9.32□□□□□ -0.92
Msh6P54276 CT010453.2-201ENSMUST00000227005 483 ntBASIC9.32□□□□□ -0.92
Msh6P54276 AC133203.1-201ENSMUST00000228241 301 ntBASIC9.32□□□□□ -0.92
Msh6P54276 Gm22748-201ENSMUST00000082493 136 ntBASIC9.32□□□□□ -0.92
Msh6P54276 Gm23734-201ENSMUST00000083753 109 ntBASIC9.32□□□□□ -0.92
Msh6P54276 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Msh6P54276 Tenm4-201ENSMUST00000107162 11021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Msh6P54276 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Msh6P54276 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Msh6P54276 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Msh6P54276 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Msh6P54276 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Msh6P54276 Wdhd1-204ENSMUST00000187531 4260 ntAPPRIS P5 TSL 5 BASIC9.31□□□□□ -0.92
Msh6P54276 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Msh6P54276 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Msh6P54276 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Msh6P54276 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Msh6P54276 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Msh6P54276 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Msh6P54276 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Msh6P54276 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Msh6P54276 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Msh6P54276 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Msh6P54276 Gm8662-201ENSMUST00000118644 574 ntBASIC9.31□□□□□ -0.92
Msh6P54276 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC9.31□□□□□ -0.92
Msh6P54276 Gm24781-201ENSMUST00000157636 117 ntBASIC9.31□□□□□ -0.92
Msh6P54276 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC9.31□□□□□ -0.92
Msh6P54276 Mir7033-201ENSMUST00000184259 81 ntBASIC9.31□□□□□ -0.92
Msh6P54276 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC9.31□□□□□ -0.92
Msh6P54276 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC9.31□□□□□ -0.92
Msh6P54276 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Msh6P54276 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 111.3 ms