Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Klf10-202ENSMUST00000226363 2917 ntBASIC11.18□□□□□ -0.62
Cux1P53564 Thrb-202ENSMUST00000022304 6200 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cux1P53564 Pcdhb11-201ENSMUST00000053073 4419 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cux1P53564 Prokr1-203ENSMUST00000204682 4230 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cux1P53564 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC11.18□□□□□ -0.62
Cux1P53564 Gm20045-201ENSMUST00000192658 5577 ntBASIC11.18□□□□□ -0.62
Cux1P53564 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cux1P53564 Sec24c-201ENSMUST00000048657 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cux1P53564 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cux1P53564 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC11.18□□□□□ -0.62
Cux1P53564 Adgrl2-208ENSMUST00000197567 5585 ntAPPRIS P2 TSL 2 BASIC11.18□□□□□ -0.62
Cux1P53564 Sulf1-205ENSMUST00000186051 4563 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cux1P53564 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cux1P53564 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cux1P53564 Map3k20-204ENSMUST00000135469 6663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cux1P53564 BC025920-201ENSMUST00000099442 2785 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cux1P53564 Gm14864-201ENSMUST00000116164 1087 ntBASIC11.18□□□□□ -0.62
Cux1P53564 Gm14729-201ENSMUST00000118373 689 ntBASIC11.18□□□□□ -0.62
Cux1P53564 Gm14070-201ENSMUST00000120773 428 ntBASIC11.18□□□□□ -0.62
Cux1P53564 Gm11472-201ENSMUST00000121305 556 ntBASIC11.18□□□□□ -0.62
Cux1P53564 Gm10913-201ENSMUST00000133732 463 ntBASIC11.18□□□□□ -0.62
Cux1P53564 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cux1P53564 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC11.18□□□□□ -0.62
Cux1P53564 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cux1P53564 Gm2774-201ENSMUST00000213650 1165 ntBASIC11.18□□□□□ -0.62
Cux1P53564 Gm18789-201ENSMUST00000216115 550 ntBASIC11.18□□□□□ -0.62
Cux1P53564 Gm2840-201ENSMUST00000048361 411 ntBASIC11.18□□□□□ -0.62
Cux1P53564 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cux1P53564 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cux1P53564 Gm24451-201ENSMUST00000083353 133 ntBASIC11.18□□□□□ -0.62
Cux1P53564 Olfr56-206ENSMUST00000203810 1990 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cux1P53564 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cux1P53564 Cacna1f-202ENSMUST00000115726 6079 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cux1P53564 Dhx8-201ENSMUST00000039152 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cux1P53564 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cux1P53564 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Cux1P53564 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cux1P53564 Pofut1-206ENSMUST00000123487 4143 ntTSL 2 BASIC11.18□□□□□ -0.62
Cux1P53564 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cux1P53564 Wipf3-206ENSMUST00000172046 4204 ntAPPRIS P4 TSL 5 BASIC11.17□□□□□ -0.62
Cux1P53564 Nrp2-205ENSMUST00000114155 6534 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cux1P53564 Gm42668-201ENSMUST00000200747 2487 ntBASIC11.17□□□□□ -0.62
Cux1P53564 Tbx22-203ENSMUST00000168174 5217 ntAPPRIS P4 TSL 2 BASIC11.17□□□□□ -0.62
Cux1P53564 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cux1P53564 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cux1P53564 Gm14466-201ENSMUST00000119028 451 ntBASIC11.17□□□□□ -0.62
Cux1P53564 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cux1P53564 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC11.17□□□□□ -0.62
Cux1P53564 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC11.17□□□□□ -0.62
Cux1P53564 Gm19175-201ENSMUST00000199895 916 ntBASIC11.17□□□□□ -0.62
Cux1P53564 Gm44411-201ENSMUST00000204172 349 ntBASIC11.17□□□□□ -0.62
Cux1P53564 Gm18469-201ENSMUST00000208850 439 ntBASIC11.17□□□□□ -0.62
Cux1P53564 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC11.17□□□□□ -0.62
Cux1P53564 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC11.17□□□□□ -0.62
Cux1P53564 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cux1P53564 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cux1P53564 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Cux1P53564 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC11.17□□□□□ -0.62
Cux1P53564 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Cux1P53564 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC11.17□□□□□ -0.62
Cux1P53564 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cux1P53564 Lcorl-201ENSMUST00000016026 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cux1P53564 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Cux1P53564 Gm2a-201ENSMUST00000000608 4127 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cux1P53564 Bcor-201ENSMUST00000043441 6113 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Cux1P53564 Wwp1-202ENSMUST00000108246 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cux1P53564 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC11.17□□□□□ -0.62
Cux1P53564 Cndp1-201ENSMUST00000070139 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cux1P53564 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cux1P53564 Sfmbt1-204ENSMUST00000227303 2960 ntBASIC11.17□□□□□ -0.62
Cux1P53564 Col4a5-202ENSMUST00000112931 6536 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cux1P53564 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cux1P53564 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cux1P53564 Olfr63-203ENSMUST00000217023 7023 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cux1P53564 Add1-201ENSMUST00000001108 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cux1P53564 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cux1P53564 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cux1P53564 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC11.16□□□□□ -0.62
Cux1P53564 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cux1P53564 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cux1P53564 Gm6451-201ENSMUST00000121488 717 ntBASIC11.16□□□□□ -0.62
Cux1P53564 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC11.16□□□□□ -0.62
Cux1P53564 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Cux1P53564 Gm44566-201ENSMUST00000207638 304 ntBASIC11.16□□□□□ -0.62
Cux1P53564 Gm45432-201ENSMUST00000210391 416 ntBASIC11.16□□□□□ -0.62
Cux1P53564 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC11.16□□□□□ -0.62
Cux1P53564 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cux1P53564 AC154324.1-201ENSMUST00000226711 814 ntBASIC11.16□□□□□ -0.62
Cux1P53564 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Cux1P53564 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Cux1P53564 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cux1P53564 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cux1P53564 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cux1P53564 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cux1P53564 Gm14896-201ENSMUST00000121311 1351 ntBASIC11.16□□□□□ -0.62
Cux1P53564 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cux1P53564 Pcdhb3-201ENSMUST00000051754 3787 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Cux1P53564 Gm14116-201ENSMUST00000117733 805 ntBASIC11.15□□□□□ -0.62
Cux1P53564 Gm12101-201ENSMUST00000121590 390 ntBASIC11.15□□□□□ -0.62
Cux1P53564 BC064078-201ENSMUST00000122939 570 ntBASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms