Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 AC166358.8-201ENSMUST00000223288 105 ntBASIC6.63□□□□□ -1.35
Rfx3P48381 AC124739.1-201ENSMUST00000223433 148 ntBASIC6.63□□□□□ -1.35
Rfx3P48381 AC069562.1-201ENSMUST00000224206 434 ntBASIC6.63□□□□□ -1.35
Rfx3P48381 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC6.63□□□□□ -1.35
Rfx3P48381 AC137950.1-201ENSMUST00000228553 515 ntBASIC6.63□□□□□ -1.35
Rfx3P48381 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 Gm5316-201ENSMUST00000050391 270 ntBASIC6.63□□□□□ -1.35
Rfx3P48381 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Rfx3P48381 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 Gm25926-201ENSMUST00000082899 160 ntBASIC6.63□□□□□ -1.35
Rfx3P48381 n-R5s156-201ENSMUST00000083377 105 ntBASIC6.63□□□□□ -1.35
Rfx3P48381 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Rfx3P48381 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Rfx3P48381 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.63□□□□□ -1.35
Rfx3P48381 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 AC139758.3-201ENSMUST00000226853 2704 ntBASIC6.63□□□□□ -1.35
Rfx3P48381 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Rfx3P48381 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx3P48381 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx3P48381 AC154270.2-201ENSMUST00000226755 2306 ntBASIC6.62□□□□□ -1.35
Rfx3P48381 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx3P48381 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx3P48381 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx3P48381 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx3P48381 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx3P48381 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
Rfx3P48381 Gm43982-201ENSMUST00000204995 1829 ntBASIC6.62□□□□□ -1.35
Rfx3P48381 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx3P48381 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx3P48381 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx3P48381 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx3P48381 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx3P48381 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC6.62□□□□□ -1.35
Rfx3P48381 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx3P48381 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx3P48381 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Rfx3P48381 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Rfx3P48381 Gm26014-201ENSMUST00000104405 132 ntBASIC6.62□□□□□ -1.35
Rfx3P48381 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC6.62□□□□□ -1.35
Rfx3P48381 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx3P48381 Gm14891-201ENSMUST00000117378 596 ntBASIC6.62□□□□□ -1.35
Rfx3P48381 Gm12219-201ENSMUST00000119198 443 ntBASIC6.62□□□□□ -1.35
Rfx3P48381 Gm12593-201ENSMUST00000120981 743 ntBASIC6.62□□□□□ -1.35
Rfx3P48381 Gm12632-201ENSMUST00000121223 495 ntBASIC6.62□□□□□ -1.35
Rfx3P48381 Gm15079-201ENSMUST00000121943 216 ntBASIC6.62□□□□□ -1.35
Rfx3P48381 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC6.62□□□□□ -1.35
Rfx3P48381 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC6.62□□□□□ -1.35
Rfx3P48381 Gm22408-201ENSMUST00000174925 65 ntBASIC6.62□□□□□ -1.35
Rfx3P48381 Gm20702-201ENSMUST00000176181 460 ntBASIC6.62□□□□□ -1.35
Rfx3P48381 Gm5445-201ENSMUST00000180224 480 ntBASIC6.62□□□□□ -1.35
Rfx3P48381 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC6.62□□□□□ -1.35
Rfx3P48381 Gm8304-201ENSMUST00000185744 584 ntBASIC6.62□□□□□ -1.35
Rfx3P48381 Gm8524-201ENSMUST00000186232 379 ntBASIC6.62□□□□□ -1.35
Rfx3P48381 Gm18033-201ENSMUST00000186678 550 ntBASIC6.62□□□□□ -1.35
Rfx3P48381 Gm8004-201ENSMUST00000187782 617 ntBASIC6.62□□□□□ -1.35
Rfx3P48381 Gm18351-201ENSMUST00000188646 883 ntBASIC6.62□□□□□ -1.35
Rfx3P48381 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx3P48381 Gm43542-201ENSMUST00000199505 379 ntBASIC6.62□□□□□ -1.35
Rfx3P48381 Gm9497-201ENSMUST00000199908 538 ntBASIC6.62□□□□□ -1.35
Rfx3P48381 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx3P48381 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC6.62□□□□□ -1.35
Rfx3P48381 Gm29977-201ENSMUST00000206804 724 ntBASIC6.62□□□□□ -1.35
Rfx3P48381 Gm18469-201ENSMUST00000208850 439 ntBASIC6.62□□□□□ -1.35
Rfx3P48381 Gm33778-201ENSMUST00000216884 704 ntBASIC6.62□□□□□ -1.35
Rfx3P48381 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx3P48381 Gm18243-201ENSMUST00000220756 887 ntBASIC6.62□□□□□ -1.35
Rfx3P48381 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC6.62□□□□□ -1.35
Rfx3P48381 Gm18619-201ENSMUST00000222722 1147 ntBASIC6.62□□□□□ -1.35
Rfx3P48381 AC122309.1-201ENSMUST00000226945 421 ntBASIC6.62□□□□□ -1.35
Rfx3P48381 AC131586.4-201ENSMUST00000228424 668 ntBASIC6.62□□□□□ -1.35
Rfx3P48381 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx3P48381 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx3P48381 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
Rfx3P48381 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Rfx3P48381 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Rfx3P48381 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx3P48381 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC6.62□□□□□ -1.35
Rfx3P48381 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx3P48381 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx3P48381 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx3P48381 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx3P48381 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Rfx3P48381 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Rfx3P48381 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Rfx3P48381 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Rfx3P48381 Olfr702-204ENSMUST00000219803 1646 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Rfx3P48381 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx3P48381 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx3P48381 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Rfx3P48381 Gm6640-201ENSMUST00000120629 1587 ntBASIC6.61□□□□□ -1.35
Rfx3P48381 Gm2654-201ENSMUST00000221381 1592 ntBASIC6.61□□□□□ -1.35
Rfx3P48381 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms