Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm22817-201ENSMUST00000157448 356 ntBASIC9.17□□□□□ -0.94
Rfx1P48377 Gm16580-201ENSMUST00000162696 1044 ntBASIC9.17□□□□□ -0.94
Rfx1P48377 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC9.17□□□□□ -0.94
Rfx1P48377 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC9.17□□□□□ -0.94
Rfx1P48377 Gm25442-201ENSMUST00000177270 92 ntBASIC9.17□□□□□ -0.94
Rfx1P48377 Gm3002-202ENSMUST00000178256 444 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rfx1P48377 Gm2974-202ENSMUST00000180184 447 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Rfx1P48377 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC9.17□□□□□ -0.94
Rfx1P48377 Gm28609-201ENSMUST00000186515 463 ntTSL 3 BASIC9.17□□□□□ -0.94
Rfx1P48377 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC9.17□□□□□ -0.94
Rfx1P48377 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rfx1P48377 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC9.17□□□□□ -0.94
Rfx1P48377 Gm43471-201ENSMUST00000197550 467 ntBASIC9.17□□□□□ -0.94
Rfx1P48377 Gm8489-201ENSMUST00000209876 1152 ntBASIC9.17□□□□□ -0.94
Rfx1P48377 Gm39662-201ENSMUST00000211909 1227 ntTSL 5 BASIC9.17□□□□□ -0.94
Rfx1P48377 5033426E14Rik-201ENSMUST00000212462 783 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rfx1P48377 AC168059.2-201ENSMUST00000224473 333 ntBASIC9.17□□□□□ -0.94
Rfx1P48377 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rfx1P48377 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rfx1P48377 Klk1b11-201ENSMUST00000007156 863 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rfx1P48377 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC9.17□□□□□ -0.94
Rfx1P48377 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC9.17□□□□□ -0.94
Rfx1P48377 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rfx1P48377 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rfx1P48377 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rfx1P48377 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Rfx1P48377 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rfx1P48377 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rfx1P48377 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC9.16□□□□□ -0.94
Rfx1P48377 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Rfx1P48377 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rfx1P48377 CT009480.1-201ENSMUST00000225771 4480 ntBASIC9.16□□□□□ -0.94
Rfx1P48377 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rfx1P48377 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rfx1P48377 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC9.16□□□□□ -0.94
Rfx1P48377 Gm14762-202ENSMUST00000122953 1430 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rfx1P48377 Gm10258-201ENSMUST00000091270 2123 ntBASIC9.16□□□□□ -0.94
Rfx1P48377 Gm44021-201ENSMUST00000203055 3516 ntBASIC9.16□□□□□ -0.94
Rfx1P48377 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rfx1P48377 Gm37372-201ENSMUST00000193577 3311 ntBASIC9.16□□□□□ -0.94
Rfx1P48377 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rfx1P48377 Nppb-201ENSMUST00000103231 781 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rfx1P48377 Gm25501-201ENSMUST00000104429 132 ntBASIC9.16□□□□□ -0.94
Rfx1P48377 Gm12262-201ENSMUST00000119915 305 ntBASIC9.16□□□□□ -0.94
Rfx1P48377 Gm14450-201ENSMUST00000119984 240 ntBASIC9.16□□□□□ -0.94
Rfx1P48377 Gm11809-201ENSMUST00000120923 950 ntBASIC9.16□□□□□ -0.94
Rfx1P48377 Gm11278-201ENSMUST00000121002 997 ntBASIC9.16□□□□□ -0.94
Rfx1P48377 Rpl10-ps6-201ENSMUST00000121321 642 ntBASIC9.16□□□□□ -0.94
Rfx1P48377 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC9.16□□□□□ -0.94
Rfx1P48377 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rfx1P48377 Gm22818-201ENSMUST00000157446 104 ntBASIC9.16□□□□□ -0.94
Rfx1P48377 Ighv1-33-201ENSMUST00000193220 350 ntBASIC9.16□□□□□ -0.94
Rfx1P48377 4930553I04Rik-201ENSMUST00000196722 670 ntBASIC9.16□□□□□ -0.94
Rfx1P48377 Gm3774-201ENSMUST00000209773 435 ntBASIC9.16□□□□□ -0.94
Rfx1P48377 Rpl10-ps5-201ENSMUST00000212707 642 ntBASIC9.16□□□□□ -0.94
Rfx1P48377 AC134607.1-201ENSMUST00000214707 485 ntBASIC9.16□□□□□ -0.94
Rfx1P48377 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC9.16□□□□□ -0.94
Rfx1P48377 Gm3379-201ENSMUST00000222259 642 ntBASIC9.16□□□□□ -0.94
Rfx1P48377 CT010480.1-201ENSMUST00000223612 363 ntBASIC9.16□□□□□ -0.94
Rfx1P48377 AC154747.2-201ENSMUST00000225109 780 ntBASIC9.16□□□□□ -0.94
Rfx1P48377 AC130547.1-201ENSMUST00000228079 1047 ntBASIC9.16□□□□□ -0.94
Rfx1P48377 AC136376.1-201ENSMUST00000228496 950 ntBASIC9.16□□□□□ -0.94
Rfx1P48377 4930553J12Rik-201ENSMUST00000023648 381 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Rfx1P48377 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC9.16□□□□□ -0.94
Rfx1P48377 Gm10123-201ENSMUST00000075723 490 ntBASIC9.16□□□□□ -0.94
Rfx1P48377 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rfx1P48377 2310069B03Rik-202ENSMUST00000186147 1833 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rfx1P48377 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rfx1P48377 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rfx1P48377 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rfx1P48377 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rfx1P48377 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rfx1P48377 Sema3d-205ENSMUST00000197927 3207 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rfx1P48377 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rfx1P48377 AC123705.1-201ENSMUST00000222512 2058 ntBASIC9.16□□□□□ -0.94
Rfx1P48377 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rfx1P48377 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC9.15□□□□□ -0.94
Rfx1P48377 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Rfx1P48377 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rfx1P48377 Gm42930-201ENSMUST00000200872 3260 ntBASIC9.15□□□□□ -0.94
Rfx1P48377 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rfx1P48377 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Rfx1P48377 Snhg17-209ENSMUST00000186993 3144 ntBASIC9.15□□□□□ -0.94
Rfx1P48377 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC9.15□□□□□ -0.94
Rfx1P48377 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rfx1P48377 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Rfx1P48377 Mir669p-2-201ENSMUST00000103868 87 ntBASIC9.15□□□□□ -0.94
Rfx1P48377 Mir669p-1-201ENSMUST00000103884 87 ntBASIC9.15□□□□□ -0.94
Rfx1P48377 Ifna13-201ENSMUST00000105149 819 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Rfx1P48377 Gm8818-201ENSMUST00000110797 1047 ntBASIC9.15□□□□□ -0.94
Rfx1P48377 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rfx1P48377 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC9.15□□□□□ -0.94
Rfx1P48377 Gm11220-201ENSMUST00000118844 475 ntBASIC9.15□□□□□ -0.94
Rfx1P48377 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC9.15□□□□□ -0.94
Rfx1P48377 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Rfx1P48377 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC9.15□□□□□ -0.94
Rfx1P48377 Gm14010-201ENSMUST00000131961 374 ntTSL 2 BASIC9.15□□□□□ -0.94
Rfx1P48377 Gm14225-201ENSMUST00000142310 539 ntTSL 2 BASIC9.15□□□□□ -0.94
Rfx1P48377 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC9.15□□□□□ -0.94
Rfx1P48377 Gm16554-201ENSMUST00000159471 460 ntTSL 3 BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms