Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm44911-201ENSMUST00000208436 1062 ntBASIC10.85□□□□□ -0.67
Chd1P40201 Gm19972-201ENSMUST00000218180 5664 ntBASIC10.85□□□□□ -0.67
Chd1P40201 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd1P40201 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd1P40201 Trcg1-201ENSMUST00000093837 2701 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Chd1P40201 B020014A21Rik-201ENSMUST00000217333 1938 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chd1P40201 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd1P40201 Gm8107-201ENSMUST00000117477 2009 ntBASIC10.85□□□□□ -0.67
Chd1P40201 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd1P40201 Ppp6c-201ENSMUST00000028087 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd1P40201 Gm43910-201ENSMUST00000204561 3241 ntBASIC10.85□□□□□ -0.67
Chd1P40201 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd1P40201 Zfp800-201ENSMUST00000035930 3881 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd1P40201 Zmym3-203ENSMUST00000117901 5178 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chd1P40201 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chd1P40201 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Chd1P40201 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd1P40201 Frmd6-201ENSMUST00000057859 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chd1P40201 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd1P40201 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC10.84□□□□□ -0.67
Chd1P40201 Gm2447-202ENSMUST00000193813 1815 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chd1P40201 AC153143.2-201ENSMUST00000220999 1804 ntBASIC10.84□□□□□ -0.67
Chd1P40201 Sfi1-210ENSMUST00000140846 3604 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Chd1P40201 Gm15209-201ENSMUST00000117703 400 ntBASIC10.84□□□□□ -0.67
Chd1P40201 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Chd1P40201 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC10.84□□□□□ -0.67
Chd1P40201 Gm25387-201ENSMUST00000157813 132 ntBASIC10.84□□□□□ -0.67
Chd1P40201 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd1P40201 Gm7426-201ENSMUST00000179046 404 ntBASIC10.84□□□□□ -0.67
Chd1P40201 Mir7008-201ENSMUST00000184398 63 ntBASIC10.84□□□□□ -0.67
Chd1P40201 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC10.84□□□□□ -0.67
Chd1P40201 Gm43725-201ENSMUST00000200122 369 ntBASIC10.84□□□□□ -0.67
Chd1P40201 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Chd1P40201 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC10.84□□□□□ -0.67
Chd1P40201 Gm9293-201ENSMUST00000223096 306 ntBASIC10.84□□□□□ -0.67
Chd1P40201 Gm24924-201ENSMUST00000084007 164 ntBASIC10.84□□□□□ -0.67
Chd1P40201 Olfr467-201ENSMUST00000084756 927 ntBASIC10.84□□□□□ -0.67
Chd1P40201 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd1P40201 Ccnd2-201ENSMUST00000000188 6330 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd1P40201 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd1P40201 Dpp6-202ENSMUST00000101471 4491 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd1P40201 Ccdc116-201ENSMUST00000023452 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd1P40201 Tacc2-203ENSMUST00000084513 9029 ntAPPRIS P4 TSL 5 BASIC10.84□□□□□ -0.67
Chd1P40201 Fmr1os-201ENSMUST00000181533 2743 ntTSL 2 BASIC10.84□□□□□ -0.67
Chd1P40201 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd1P40201 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd1P40201 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chd1P40201 Gm12901-201ENSMUST00000118690 532 ntBASIC10.84□□□□□ -0.67
Chd1P40201 Gm5390-201ENSMUST00000119069 1230 ntBASIC10.84□□□□□ -0.67
Chd1P40201 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC10.84□□□□□ -0.67
Chd1P40201 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd1P40201 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chd1P40201 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC10.84□□□□□ -0.67
Chd1P40201 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chd1P40201 AC134577.3-201ENSMUST00000226490 3000 ntBASIC10.84□□□□□ -0.67
Chd1P40201 Il31ra-206ENSMUST00000224510 2946 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Chd1P40201 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Chd1P40201 Gm8995-202ENSMUST00000208417 3490 ntBASIC10.83□□□□□ -0.68
Chd1P40201 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Chd1P40201 Ttll8-201ENSMUST00000109371 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd1P40201 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd1P40201 Ttc30a1-201ENSMUST00000099994 3721 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Chd1P40201 Dalir-201ENSMUST00000188773 2170 ntBASIC10.83□□□□□ -0.68
Chd1P40201 Itgam-203ENSMUST00000106242 4649 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd1P40201 AC122346.2-201ENSMUST00000224326 2931 ntBASIC10.83□□□□□ -0.68
Chd1P40201 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chd1P40201 AC154597.1-201ENSMUST00000224095 2713 ntBASIC10.83□□□□□ -0.68
Chd1P40201 Gm44117-201ENSMUST00000204442 1758 ntBASIC10.83□□□□□ -0.68
Chd1P40201 Gm8049-201ENSMUST00000214336 1782 ntBASIC10.83□□□□□ -0.68
Chd1P40201 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd1P40201 Ctnna2-201ENSMUST00000075340 2864 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Chd1P40201 Ptprc-207ENSMUST00000183301 5074 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Chd1P40201 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd1P40201 Rimklb-206ENSMUST00000204731 3039 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chd1P40201 Synj2-208ENSMUST00000115789 5130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd1P40201 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Chd1P40201 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Chd1P40201 Gm11976-201ENSMUST00000119236 295 ntBASIC10.83□□□□□ -0.68
Chd1P40201 Gm11343-201ENSMUST00000120579 599 ntBASIC10.83□□□□□ -0.68
Chd1P40201 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chd1P40201 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC10.83□□□□□ -0.68
Chd1P40201 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC10.83□□□□□ -0.68
Chd1P40201 Gm8930-201ENSMUST00000201693 768 ntBASIC10.83□□□□□ -0.68
Chd1P40201 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC10.83□□□□□ -0.68
Chd1P40201 Zfp532-201ENSMUST00000049016 5503 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chd1P40201 Epn2-201ENSMUST00000001063 4243 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd1P40201 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chd1P40201 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Chd1P40201 Gm11242-201ENSMUST00000120103 2457 ntBASIC10.83□□□□□ -0.68
Chd1P40201 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Chd1P40201 Htr4-201ENSMUST00000027560 4657 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd1P40201 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd1P40201 Gm44001-201ENSMUST00000203158 3773 ntBASIC10.82□□□□□ -0.68
Chd1P40201 Fancb-202ENSMUST00000101082 2980 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Chd1P40201 Gm10773-201ENSMUST00000218071 3935 ntBASIC10.82□□□□□ -0.68
Chd1P40201 Ints4-201ENSMUST00000026126 3240 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Chd1P40201 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC10.82□□□□□ -0.68
Chd1P40201 Gm42572-201ENSMUST00000202292 3378 ntBASIC10.82□□□□□ -0.68
Chd1P40201 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Chd1P40201 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms