Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm37669-201ENSMUST00000192184 820 ntBASIC9.48□□□□□ -0.89
Hoxc9P09633 Gm37295-201ENSMUST00000192186 109 ntBASIC9.48□□□□□ -0.89
Hoxc9P09633 Gm8924-201ENSMUST00000197405 1132 ntBASIC9.48□□□□□ -0.89
Hoxc9P09633 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Hoxc9P09633 Gm21040-201ENSMUST00000199493 1132 ntBASIC9.48□□□□□ -0.89
Hoxc9P09633 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxc9P09633 Gm43772-201ENSMUST00000202052 379 ntBASIC9.48□□□□□ -0.89
Hoxc9P09633 Gm8168-201ENSMUST00000209631 948 ntBASIC9.48□□□□□ -0.89
Hoxc9P09633 Gm45887-201ENSMUST00000212672 2998 ntBASIC9.48□□□□□ -0.89
Hoxc9P09633 AC153847.1-201ENSMUST00000214524 353 ntBASIC9.48□□□□□ -0.89
Hoxc9P09633 AC148328.2-201ENSMUST00000216960 262 ntBASIC9.48□□□□□ -0.89
Hoxc9P09633 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC9.48□□□□□ -0.89
Hoxc9P09633 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC9.48□□□□□ -0.89
Hoxc9P09633 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC9.48□□□□□ -0.89
Hoxc9P09633 AC114008.1-201ENSMUST00000226193 937 ntBASIC9.48□□□□□ -0.89
Hoxc9P09633 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxc9P09633 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Hoxc9P09633 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Hoxc9P09633 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Hoxc9P09633 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxc9P09633 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxc9P09633 CT573019.1-201ENSMUST00000227762 1689 ntBASIC9.48□□□□□ -0.89
Hoxc9P09633 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC9.48□□□□□ -0.89
Hoxc9P09633 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxc9P09633 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxc9P09633 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxc9P09633 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC9.48□□□□□ -0.89
Hoxc9P09633 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Hoxc9P09633 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Hoxc9P09633 Gm15109-201ENSMUST00000133085 2026 ntBASIC9.48□□□□□ -0.89
Hoxc9P09633 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxc9P09633 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Hoxc9P09633 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Hoxc9P09633 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxc9P09633 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC9.47□□□□□ -0.89
Hoxc9P09633 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxc9P09633 Ep400-204ENSMUST00000112436 10685 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxc9P09633 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
Hoxc9P09633 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Hoxc9P09633 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Hoxc9P09633 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxc9P09633 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxc9P09633 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxc9P09633 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxc9P09633 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxc9P09633 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxc9P09633 Gm14847-201ENSMUST00000121978 519 ntBASIC9.47□□□□□ -0.89
Hoxc9P09633 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC9.47□□□□□ -0.89
Hoxc9P09633 Gm10364-202ENSMUST00000153034 1001 ntBASIC9.47□□□□□ -0.89
Hoxc9P09633 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC9.47□□□□□ -0.89
Hoxc9P09633 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC9.47□□□□□ -0.89
Hoxc9P09633 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC9.47□□□□□ -0.89
Hoxc9P09633 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxc9P09633 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC9.47□□□□□ -0.89
Hoxc9P09633 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC9.47□□□□□ -0.89
Hoxc9P09633 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC9.47□□□□□ -0.89
Hoxc9P09633 AC124184.1-201ENSMUST00000218167 283 ntBASIC9.47□□□□□ -0.89
Hoxc9P09633 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC9.47□□□□□ -0.89
Hoxc9P09633 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Hoxc9P09633 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxc9P09633 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxc9P09633 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Hoxc9P09633 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Hoxc9P09633 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC9.47□□□□□ -0.89
Hoxc9P09633 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxc9P09633 Tenm4-201ENSMUST00000107162 11021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxc9P09633 Fam135b-201ENSMUST00000022953 4623 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Hoxc9P09633 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxc9P09633 AC159196.3-201ENSMUST00000224307 1841 ntBASIC9.47□□□□□ -0.89
Hoxc9P09633 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxc9P09633 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Hoxc9P09633 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Hoxc9P09633 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC9.46□□□□□ -0.89
Hoxc9P09633 Gm43292-201ENSMUST00000199580 2449 ntBASIC9.46□□□□□ -0.89
Hoxc9P09633 Katnb1-201ENSMUST00000034239 3777 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Hoxc9P09633 Gm44531-201ENSMUST00000208364 2000 ntBASIC9.46□□□□□ -0.89
Hoxc9P09633 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC9.46□□□□□ -0.89
Hoxc9P09633 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Hoxc9P09633 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Hoxc9P09633 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Hoxc9P09633 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Hoxc9P09633 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Hoxc9P09633 BC048644-201ENSMUST00000140928 3522 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Hoxc9P09633 Gm45174-201ENSMUST00000208884 3065 ntBASIC9.46□□□□□ -0.89
Hoxc9P09633 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Hoxc9P09633 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC9.46□□□□□ -0.89
Hoxc9P09633 Gm22256-201ENSMUST00000102291 107 ntBASIC9.46□□□□□ -0.9
Hoxc9P09633 Gm12175-201ENSMUST00000122081 345 ntBASIC9.46□□□□□ -0.9
Hoxc9P09633 Gm16276-201ENSMUST00000131218 262 ntBASIC9.46□□□□□ -0.9
Hoxc9P09633 Gm25969-201ENSMUST00000157166 132 ntBASIC9.46□□□□□ -0.9
Hoxc9P09633 Gm24545-201ENSMUST00000158651 85 ntBASIC9.46□□□□□ -0.9
Hoxc9P09633 Gm6921-201ENSMUST00000161478 435 ntBASIC9.46□□□□□ -0.9
Hoxc9P09633 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC9.46□□□□□ -0.9
Hoxc9P09633 Gm28929-201ENSMUST00000185330 1193 ntBASIC9.46□□□□□ -0.9
Hoxc9P09633 Gm18699-201ENSMUST00000190713 243 ntBASIC9.46□□□□□ -0.9
Hoxc9P09633 Gm42723-201ENSMUST00000199966 1044 ntBASIC9.46□□□□□ -0.9
Hoxc9P09633 AC079644.2-201ENSMUST00000220581 322 ntBASIC9.46□□□□□ -0.9
Hoxc9P09633 Gm2754-201ENSMUST00000223383 589 ntBASIC9.46□□□□□ -0.9
Hoxc9P09633 AC164294.1-201ENSMUST00000224682 688 ntBASIC9.46□□□□□ -0.9
Hoxc9P09633 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms