Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm35106-201ENSMUST00000192731 250 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm3745-201ENSMUST00000193773 421 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm36953-201ENSMUST00000195295 268 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm8850-201ENSMUST00000195316 588 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm8861-201ENSMUST00000196346 832 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm5288-201ENSMUST00000198323 1119 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm30270-201ENSMUST00000202675 524 ntTSL 2 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm6749-201ENSMUST00000203838 405 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm44972-201ENSMUST00000206419 406 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm45842-201ENSMUST00000211876 753 ntTSL 3 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm45866-201ENSMUST00000212425 326 ntTSL 3 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Dppa5b-201ENSMUST00000214261 348 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm33053-201ENSMUST00000215275 1144 ntTSL 5 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Dppa5c-201ENSMUST00000216268 348 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm46192-201ENSMUST00000217894 326 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm33037-201ENSMUST00000217927 642 ntTSL 3 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm4808-201ENSMUST00000222283 1203 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC6.83□□□□□ -1.32
Hoxd3P09027 AC102291.1-201ENSMUST00000227164 529 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 AC146601.1-201ENSMUST00000227910 905 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Olfr518-201ENSMUST00000059617 1002 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm23242-201ENSMUST00000083055 107 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Optn-201ENSMUST00000027986 2411 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm4907-201ENSMUST00000116614 1493 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Olfr444-202ENSMUST00000204092 1472 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm38090-201ENSMUST00000195733 1942 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Ankfn1-202ENSMUST00000128717 2391 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Olfr1214-202ENSMUST00000216026 2126 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Card11-201ENSMUST00000085786 4107 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Rai14-202ENSMUST00000169385 4759 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 6430550D23Rik-202ENSMUST00000109617 1872 ntAPPRIS P4 TSL 5 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm20589-201ENSMUST00000204099 2530 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Tsr2-201ENSMUST00000026295 3804 ntTSL 2 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Mlst8-202ENSMUST00000179163 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Ndrg3-203ENSMUST00000109558 4023 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm44437-201ENSMUST00000203832 4038 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Ralgps2-201ENSMUST00000027886 4237 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Tnfaip1-202ENSMUST00000108277 3768 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Lpin1-205ENSMUST00000221297 3100 ntAPPRIS P4 TSL 5 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm2447-202ENSMUST00000193813 1815 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Inpp5k-201ENSMUST00000006286 2679 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Trpc7-202ENSMUST00000109871 3519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gucy2d-201ENSMUST00000098274 3537 ntTSL 5 BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm44763-201ENSMUST00000208287 2019 ntBASIC6.83□□□□□ -1.32
Hoxd3P09027 Cul2-201ENSMUST00000025073 3727 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Hoxd3P09027 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Dixdc1-206ENSMUST00000120622 1379 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Pax4-201ENSMUST00000031718 1370 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 AC169985.1-201ENSMUST00000223648 2439 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Adtrp-201ENSMUST00000072012 2440 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm7739-201ENSMUST00000221131 1560 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Mterf2-201ENSMUST00000050813 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Rapgef5-206ENSMUST00000222185 5508 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Cldn1-201ENSMUST00000023154 3247 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Arhgef10l-205ENSMUST00000105798 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Mef2c-218ENSMUST00000198199 2589 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Lrit2-201ENSMUST00000057176 2790 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm12436-201ENSMUST00000131099 2959 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Scml2-204ENSMUST00000087090 2953 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Hoxd3P09027 Rab27a-203ENSMUST00000184146 3168 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm42515-201ENSMUST00000199936 3583 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC6.82□□□□□ -1.32
Hoxd3P09027 Igsf9b-204ENSMUST00000214357 16144 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Hoxd3P09027 Smok3b-201ENSMUST00000100537 2333 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Olfr169-202ENSMUST00000215040 2316 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Hoxd3P09027 Rpgr-205ENSMUST00000115533 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Drp2-202ENSMUST00000113224 4147 ntTSL 5 BASIC6.82□□□□□ -1.32
Hoxd3P09027 Ahcyl2-203ENSMUST00000115238 5129 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Zfp949-204ENSMUST00000162827 3472 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Tubd1-202ENSMUST00000069503 1871 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Phactr4-203ENSMUST00000102568 4614 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm22471-201ENSMUST00000104116 130 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Inca1-204ENSMUST00000108543 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Rhox4f-201ENSMUST00000115170 948 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm14197-201ENSMUST00000117480 1049 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm11987-201ENSMUST00000118524 381 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm11708-201ENSMUST00000119530 832 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm12275-201ENSMUST00000119805 307 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm12578-201ENSMUST00000121244 417 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Defa-ps16-201ENSMUST00000121939 171 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 n-R5s207-201ENSMUST00000122497 118 ntBASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC6.82□□□□□ -1.32
Hoxd3P09027 Gm1322-201ENSMUST00000134620 704 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
Hoxd3P09027 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC6.82□□□□□ -1.32
Hoxd3P09027 Glipr1l2-202ENSMUST00000148897 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Hoxd3P09027 Ntpcr-208ENSMUST00000152189 822 ntTSL 3 BASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms