Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm28222-201ENSMUST00000191210 615 ntBASIC13.34□□□□□ -0.27
Ccdc180J3QNE4 Gm28776-201ENSMUST00000191282 615 ntBASIC13.34□□□□□ -0.27
Ccdc180J3QNE4 Gm29306-201ENSMUST00000191366 615 ntBASIC13.34□□□□□ -0.27
Ccdc180J3QNE4 Gm29618-201ENSMUST00000191423 615 ntBASIC13.34□□□□□ -0.27
Ccdc180J3QNE4 Gm28136-210ENSMUST00000191432 615 ntBASIC13.34□□□□□ -0.27
Ccdc180J3QNE4 Gm29251-201ENSMUST00000191480 615 ntBASIC13.34□□□□□ -0.27
Ccdc180J3QNE4 Gm28658-201ENSMUST00000191532 615 ntBASIC13.34□□□□□ -0.27
Ccdc180J3QNE4 Gm32180-201ENSMUST00000192415 615 ntBASIC13.34□□□□□ -0.27
Ccdc180J3QNE4 Gm30598-201ENSMUST00000192620 615 ntBASIC13.34□□□□□ -0.27
Ccdc180J3QNE4 Gm37627-201ENSMUST00000194585 615 ntBASIC13.34□□□□□ -0.27
Ccdc180J3QNE4 Gm34274-201ENSMUST00000195825 615 ntBASIC13.34□□□□□ -0.27
Ccdc180J3QNE4 Gm7452-201ENSMUST00000200764 788 ntBASIC13.34□□□□□ -0.27
Ccdc180J3QNE4 Gm43459-201ENSMUST00000202093 331 ntBASIC13.34□□□□□ -0.27
Ccdc180J3QNE4 Gm18995-201ENSMUST00000202981 520 ntBASIC13.34□□□□□ -0.27
Ccdc180J3QNE4 Gm45394-201ENSMUST00000209240 1175 ntBASIC13.34□□□□□ -0.27
Ccdc180J3QNE4 Gm7351-201ENSMUST00000210745 580 ntBASIC13.34□□□□□ -0.27
Ccdc180J3QNE4 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc180J3QNE4 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc180J3QNE4 AC123917.1-201ENSMUST00000228063 1048 ntBASIC13.34□□□□□ -0.27
Ccdc180J3QNE4 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc180J3QNE4 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc180J3QNE4 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc180J3QNE4 Nup133-201ENSMUST00000044795 5808 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc180J3QNE4 Pik3ca-203ENSMUST00000108243 6689 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Ccdc180J3QNE4 Glod4-206ENSMUST00000169701 4203 ntTSL 2 BASIC13.33□□□□□ -0.28
Ccdc180J3QNE4 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc180J3QNE4 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc180J3QNE4 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc180J3QNE4 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC13.33□□□□□ -0.28
Ccdc180J3QNE4 Gm22024-201ENSMUST00000122733 287 ntBASIC13.33□□□□□ -0.28
Ccdc180J3QNE4 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc180J3QNE4 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccdc180J3QNE4 Gm7019-201ENSMUST00000194122 369 ntBASIC13.33□□□□□ -0.28
Ccdc180J3QNE4 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC13.33□□□□□ -0.28
Ccdc180J3QNE4 Gm2221-201ENSMUST00000209342 418 ntBASIC13.33□□□□□ -0.28
Ccdc180J3QNE4 CT030238.4-202ENSMUST00000226143 745 ntBASIC13.33□□□□□ -0.28
Ccdc180J3QNE4 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc180J3QNE4 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc180J3QNE4 Gm37159-201ENSMUST00000192720 3605 ntBASIC13.33□□□□□ -0.28
Ccdc180J3QNE4 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc180J3QNE4 Gm38262-201ENSMUST00000194760 1382 ntBASIC13.33□□□□□ -0.28
Ccdc180J3QNE4 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc180J3QNE4 Map3k19-205ENSMUST00000208183 4865 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Gm25724-201ENSMUST00000104531 117 ntBASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Gm15203-201ENSMUST00000117668 455 ntBASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Gm15310-201ENSMUST00000117891 372 ntBASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Gm14489-201ENSMUST00000120868 901 ntBASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Gm12804-201ENSMUST00000121030 999 ntBASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 AC124395.1-201ENSMUST00000225940 707 ntBASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 AC156574.1-201ENSMUST00000227084 452 ntBASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Gm37080-201ENSMUST00000194804 2404 ntBASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Zfp68-202ENSMUST00000085852 3318 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 CT025642.2-201ENSMUST00000225009 1649 ntBASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Rngtt-202ENSMUST00000108153 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 AC153940.1-201ENSMUST00000220149 5300 ntBASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 AC187103.1-201ENSMUST00000224641 1475 ntBASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Smarca1-201ENSMUST00000077569 4024 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccdc180J3QNE4 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Pbrm1-204ENSMUST00000090214 6212 ntTSL 5 BASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Gm14116-201ENSMUST00000117733 805 ntBASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Gm9672-201ENSMUST00000166437 425 ntBASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 AC167013.4-201ENSMUST00000226712 317 ntBASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 AC135086.1-201ENSMUST00000228621 817 ntBASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 E130018O15Rik-201ENSMUST00000069741 3776 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccdc180J3QNE4 Gm15109-201ENSMUST00000133085 2026 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms