Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm13887-201ENSMUST00000119009 344 ntBASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Gm6428-201ENSMUST00000161062 345 ntBASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Gm3307-201ENSMUST00000176164 632 ntBASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Gm29357-201ENSMUST00000186877 698 ntBASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Gm43018-201ENSMUST00000198075 1275 ntBASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Gm7285-201ENSMUST00000198801 580 ntBASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Gm26541-201ENSMUST00000181866 3973 ntTSL 5 BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Chrna2-201ENSMUST00000022620 3554 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Zfp946-202ENSMUST00000120222 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Gm43383-201ENSMUST00000195981 469 ntBASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Gm43089-201ENSMUST00000199162 275 ntBASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Gm43657-201ENSMUST00000200336 3833 ntBASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Zfp40-201ENSMUST00000037057 4103 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Tbc1d15-201ENSMUST00000020339 3752 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Tnfsf8-201ENSMUST00000030047 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Gm10118-201ENSMUST00000079279 2569 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Emc1-205ENSMUST00000179784 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Gm25917-201ENSMUST00000104267 130 ntBASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Gm11625-201ENSMUST00000119535 296 ntBASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Gm42443-201ENSMUST00000198084 1155 ntBASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Gm33601-201ENSMUST00000210001 961 ntBASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Gm8058-201ENSMUST00000217247 587 ntBASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 AC187103.4-201ENSMUST00000225399 300 ntBASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Gm16536-201ENSMUST00000162209 1589 ntBASIC7.02□□□□□ -1.28
Col6a3E9PWQ3 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
Col6a3E9PWQ3 Zfp563-201ENSMUST00000131722 1938 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Ccdc114-203ENSMUST00000210602 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Olfr1432-202ENSMUST00000207710 2068 ntAPPRIS P5 TSL 5 BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Igkv12-89-201ENSMUST00000103335 335 ntAPPRIS ALT2 BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Gm14237-201ENSMUST00000122080 430 ntBASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Gm24327-201ENSMUST00000175108 78 ntBASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Gm24756-201ENSMUST00000177002 96 ntBASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Gm20203-201ENSMUST00000192352 332 ntBASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Gm10123-201ENSMUST00000075723 490 ntBASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Gm42503-201ENSMUST00000199080 3706 ntBASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Sgsh-202ENSMUST00000100172 4223 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Mstn-202ENSMUST00000191197 2461 ntTSL 5 BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Gm15531-201ENSMUST00000118062 252 ntBASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Gm4373-201ENSMUST00000178571 556 ntBASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Gm5272-201ENSMUST00000182730 982 ntBASIC7.02□□□□□ -1.29
Col6a3E9PWQ3 Gm7802-201ENSMUST00000216464 262 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms