Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Scn3aA2ASI5 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Gm15575-201ENSMUST00000119414 1581 ntBASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Gm15203-201ENSMUST00000117668 455 ntBASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Gm12740-201ENSMUST00000118794 308 ntBASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Mir7033-201ENSMUST00000184259 81 ntBASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Gm29383-201ENSMUST00000188284 480 ntBASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC8.13□□□□□ -1.11
Scn3aA2ASI5 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Gm9267-201ENSMUST00000222831 404 ntBASIC8.13□□□□□ -1.11
Scn3aA2ASI5 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Adamts6-201ENSMUST00000065766 4822 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 CT030185.2-201ENSMUST00000222614 1310 ntBASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Gm37161-201ENSMUST00000191994 2697 ntBASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 4930551I15Rik-201ENSMUST00000219700 2143 ntTSL 5 BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Ccdc47-201ENSMUST00000002043 5193 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC8.13□□□□□ -1.11
Scn3aA2ASI5 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Gm13313-201ENSMUST00000118938 1084 ntBASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Gm7289-201ENSMUST00000168993 734 ntBASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Gm7426-201ENSMUST00000179046 404 ntBASIC8.13□□□□□ -1.11
Scn3aA2ASI5 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Gm34424-201ENSMUST00000213400 782 ntBASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC8.13□□□□□ -1.11
Scn3aA2ASI5 AC157572.1-201ENSMUST00000227187 825 ntBASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Scn3aA2ASI5 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Gm26541-201ENSMUST00000181866 3973 ntTSL 5 BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Gm18451-201ENSMUST00000196759 1719 ntBASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Lsamp-202ENSMUST00000099761 8794 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Gm8662-201ENSMUST00000118644 574 ntBASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Gm12920-201ENSMUST00000121818 1186 ntBASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Gm24228-201ENSMUST00000158829 129 ntBASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Gm44471-201ENSMUST00000197963 100 ntBASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Gm43849-201ENSMUST00000201086 215 ntBASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 AC154904.1-201ENSMUST00000219510 312 ntBASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Gm19047-201ENSMUST00000220922 1099 ntBASIC8.12□□□□□ -1.11
Scn3aA2ASI5 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 AC121542.2-201ENSMUST00000227529 400 ntBASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Gm5841-201ENSMUST00000195307 2177 ntBASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Zfp445-206ENSMUST00000216063 6189 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Tubgcp5-201ENSMUST00000032627 3905 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Gm42771-201ENSMUST00000198342 2486 ntBASIC8.12□□□□□ -1.11
Scn3aA2ASI5 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Scn3aA2ASI5 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Gm15422-201ENSMUST00000117453 541 ntBASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Gm2619-202ENSMUST00000166777 651 ntBASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Gm37328-201ENSMUST00000193191 640 ntBASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Scn3aA2ASI5 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms