Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb3S4R1G7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb3S4R1G7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb3S4R1G7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb3S4R1G7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb3S4R1G7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb3S4R1G7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb3S4R1G7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
H2afb3S4R1G7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
H2afb3S4R1G7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
H2afb3S4R1G7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
H2afb3S4R1G7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
H2afb3S4R1G7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
H2afb3S4R1G7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
H2afb3S4R1G7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
H2afb3S4R1G7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb3S4R1G7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
H2afb3S4R1G7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.58■□□□□ 0.24
H2afb3S4R1G7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.58■□□□□ 0.24
H2afb3S4R1G7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb3S4R1G7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb3S4R1G7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb3S4R1G7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb3S4R1G7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb3S4R1G7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb3S4R1G7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb3S4R1G7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb3S4R1G7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb3S4R1G7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb3S4R1G7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb3S4R1G7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb3S4R1G7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb3S4R1G7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
H2afb3S4R1G7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
H2afb3S4R1G7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb3S4R1G7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb3S4R1G7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
H2afb3S4R1G7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb3S4R1G7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb3S4R1G7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb3S4R1G7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb3S4R1G7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb3S4R1G7 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.57■□□□□ 0.24
H2afb3S4R1G7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb3S4R1G7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
H2afb3S4R1G7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb3S4R1G7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb3S4R1G7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb3S4R1G7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2afb3S4R1G7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb3S4R1G7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb3S4R1G7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.56■□□□□ 0.24
H2afb3S4R1G7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb3S4R1G7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb3S4R1G7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb3S4R1G7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb3S4R1G7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb3S4R1G7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.56■□□□□ 0.24
H2afb3S4R1G7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb3S4R1G7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.56■□□□□ 0.24
H2afb3S4R1G7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb3S4R1G7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
H2afb3S4R1G7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
H2afb3S4R1G7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb3S4R1G7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb3S4R1G7 Rarb-207ENSMUST00000225921 2756 ntBASIC16.56■□□□□ 0.24
H2afb3S4R1G7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb3S4R1G7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb3S4R1G7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb3S4R1G7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
H2afb3S4R1G7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb3S4R1G7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb3S4R1G7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb3S4R1G7 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.55■□□□□ 0.24
H2afb3S4R1G7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb3S4R1G7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
H2afb3S4R1G7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
H2afb3S4R1G7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb3S4R1G7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb3S4R1G7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb3S4R1G7 Gm43060-201ENSMUST00000200621 289 ntBASIC16.55■□□□□ 0.24
H2afb3S4R1G7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.55■□□□□ 0.24
H2afb3S4R1G7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb3S4R1G7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb3S4R1G7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb3S4R1G7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb3S4R1G7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb3S4R1G7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.54■□□□□ 0.24
H2afb3S4R1G7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb3S4R1G7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb3S4R1G7 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.54■□□□□ 0.24
H2afb3S4R1G7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.54■□□□□ 0.24
H2afb3S4R1G7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.54■□□□□ 0.24
H2afb3S4R1G7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb3S4R1G7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
H2afb3S4R1G7 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb3S4R1G7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb3S4R1G7 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb3S4R1G7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb3S4R1G7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms