Protein–RNA interactions for Protein: Q9Z2E2

Mbd1, Methyl-CpG-binding domain protein 1, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd1Q9Z2E2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mbd1Q9Z2E2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mbd1Q9Z2E2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mbd1Q9Z2E2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mbd1Q9Z2E2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mbd1Q9Z2E2 Gm13534-201ENSMUST00000121169 513 ntBASIC18.83■□□□□ 0.6
Mbd1Q9Z2E2 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.83■□□□□ 0.6
Mbd1Q9Z2E2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Mbd1Q9Z2E2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mbd1Q9Z2E2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mbd1Q9Z2E2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mbd1Q9Z2E2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mbd1Q9Z2E2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mbd1Q9Z2E2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.82■□□□□ 0.6
Mbd1Q9Z2E2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mbd1Q9Z2E2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mbd1Q9Z2E2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Mbd1Q9Z2E2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Mbd1Q9Z2E2 Gm8495-201ENSMUST00000188740 694 ntBASIC18.82■□□□□ 0.6
Mbd1Q9Z2E2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.82■□□□□ 0.6
Mbd1Q9Z2E2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mbd1Q9Z2E2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mbd1Q9Z2E2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mbd1Q9Z2E2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Mbd1Q9Z2E2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mbd1Q9Z2E2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mbd1Q9Z2E2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mbd1Q9Z2E2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mbd1Q9Z2E2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mbd1Q9Z2E2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Mbd1Q9Z2E2 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Mbd1Q9Z2E2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.81■□□□□ 0.6
Mbd1Q9Z2E2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mbd1Q9Z2E2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Mbd1Q9Z2E2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.81■□□□□ 0.6
Mbd1Q9Z2E2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mbd1Q9Z2E2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.81■□□□□ 0.6
Mbd1Q9Z2E2 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.81■□□□□ 0.6
Mbd1Q9Z2E2 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mbd1Q9Z2E2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.81■□□□□ 0.6
Mbd1Q9Z2E2 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.81■□□□□ 0.6
Mbd1Q9Z2E2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mbd1Q9Z2E2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mbd1Q9Z2E2 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mbd1Q9Z2E2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.8■□□□□ 0.6
Mbd1Q9Z2E2 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.8■□□□□ 0.6
Mbd1Q9Z2E2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mbd1Q9Z2E2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mbd1Q9Z2E2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Mbd1Q9Z2E2 Gm13234-201ENSMUST00000120010 747 ntBASIC18.8■□□□□ 0.6
Mbd1Q9Z2E2 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Mbd1Q9Z2E2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mbd1Q9Z2E2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mbd1Q9Z2E2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Mbd1Q9Z2E2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mbd1Q9Z2E2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.8■□□□□ 0.6
Mbd1Q9Z2E2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Mbd1Q9Z2E2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.8■□□□□ 0.6
Mbd1Q9Z2E2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mbd1Q9Z2E2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mbd1Q9Z2E2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mbd1Q9Z2E2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mbd1Q9Z2E2 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.79■□□□□ 0.6
Mbd1Q9Z2E2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mbd1Q9Z2E2 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.79■□□□□ 0.6
Mbd1Q9Z2E2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Mbd1Q9Z2E2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mbd1Q9Z2E2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mbd1Q9Z2E2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Mbd1Q9Z2E2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mbd1Q9Z2E2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mbd1Q9Z2E2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Mbd1Q9Z2E2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Mbd1Q9Z2E2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.78■□□□□ 0.6
Mbd1Q9Z2E2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mbd1Q9Z2E2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Mbd1Q9Z2E2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mbd1Q9Z2E2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mbd1Q9Z2E2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Mbd1Q9Z2E2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Mbd1Q9Z2E2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mbd1Q9Z2E2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mbd1Q9Z2E2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.77■□□□□ 0.6
Mbd1Q9Z2E2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.77■□□□□ 0.6
Mbd1Q9Z2E2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mbd1Q9Z2E2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.77■□□□□ 0.6
Mbd1Q9Z2E2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Mbd1Q9Z2E2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Mbd1Q9Z2E2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mbd1Q9Z2E2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.77■□□□□ 0.6
Mbd1Q9Z2E2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mbd1Q9Z2E2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mbd1Q9Z2E2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Mbd1Q9Z2E2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Mbd1Q9Z2E2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Mbd1Q9Z2E2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.77■□□□□ 0.59
Mbd1Q9Z2E2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mbd1Q9Z2E2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mbd1Q9Z2E2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Mbd1Q9Z2E2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms