Protein–RNA interactions for Protein: Q9Z1X0

Ccl27, C-C motif chemokine 27, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl27Q9Z1X0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccl27Q9Z1X0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
Ccl27Q9Z1X0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.16■□□□□ 0.34
Ccl27Q9Z1X0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.16■□□□□ 0.34
Ccl27Q9Z1X0 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.16■□□□□ 0.34
Ccl27Q9Z1X0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ccl27Q9Z1X0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccl27Q9Z1X0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccl27Q9Z1X0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccl27Q9Z1X0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccl27Q9Z1X0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccl27Q9Z1X0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.15■□□□□ 0.34
Ccl27Q9Z1X0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.15■□□□□ 0.34
Ccl27Q9Z1X0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.15■□□□□ 0.34
Ccl27Q9Z1X0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccl27Q9Z1X0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccl27Q9Z1X0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccl27Q9Z1X0 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.15■□□□□ 0.34
Ccl27Q9Z1X0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.15■□□□□ 0.34
Ccl27Q9Z1X0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ccl27Q9Z1X0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccl27Q9Z1X0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ccl27Q9Z1X0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccl27Q9Z1X0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ccl27Q9Z1X0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccl27Q9Z1X0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccl27Q9Z1X0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccl27Q9Z1X0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccl27Q9Z1X0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccl27Q9Z1X0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccl27Q9Z1X0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccl27Q9Z1X0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccl27Q9Z1X0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccl27Q9Z1X0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.13■□□□□ 0.33
Ccl27Q9Z1X0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccl27Q9Z1X0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccl27Q9Z1X0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccl27Q9Z1X0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccl27Q9Z1X0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.13■□□□□ 0.33
Ccl27Q9Z1X0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccl27Q9Z1X0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccl27Q9Z1X0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccl27Q9Z1X0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccl27Q9Z1X0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccl27Q9Z1X0 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.13■□□□□ 0.33
Ccl27Q9Z1X0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccl27Q9Z1X0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccl27Q9Z1X0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccl27Q9Z1X0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.12■□□□□ 0.33
Ccl27Q9Z1X0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccl27Q9Z1X0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccl27Q9Z1X0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Ccl27Q9Z1X0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccl27Q9Z1X0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccl27Q9Z1X0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccl27Q9Z1X0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccl27Q9Z1X0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Ccl27Q9Z1X0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccl27Q9Z1X0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccl27Q9Z1X0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccl27Q9Z1X0 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.12■□□□□ 0.33
Ccl27Q9Z1X0 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.11■□□□□ 0.33
Ccl27Q9Z1X0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccl27Q9Z1X0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ccl27Q9Z1X0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccl27Q9Z1X0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccl27Q9Z1X0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.11■□□□□ 0.33
Ccl27Q9Z1X0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccl27Q9Z1X0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccl27Q9Z1X0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccl27Q9Z1X0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Ccl27Q9Z1X0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccl27Q9Z1X0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccl27Q9Z1X0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccl27Q9Z1X0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccl27Q9Z1X0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccl27Q9Z1X0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccl27Q9Z1X0 Gm13148-201ENSMUST00000118892 745 ntBASIC17.1■□□□□ 0.33
Ccl27Q9Z1X0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.1■□□□□ 0.33
Ccl27Q9Z1X0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccl27Q9Z1X0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.1■□□□□ 0.33
Ccl27Q9Z1X0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccl27Q9Z1X0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccl27Q9Z1X0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccl27Q9Z1X0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccl27Q9Z1X0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Ccl27Q9Z1X0 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccl27Q9Z1X0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccl27Q9Z1X0 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccl27Q9Z1X0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccl27Q9Z1X0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccl27Q9Z1X0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccl27Q9Z1X0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccl27Q9Z1X0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccl27Q9Z1X0 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.09■□□□□ 0.33
Ccl27Q9Z1X0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.09■□□□□ 0.33
Ccl27Q9Z1X0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ccl27Q9Z1X0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.09■□□□□ 0.33
Ccl27Q9Z1X0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccl27Q9Z1X0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms