Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.77■□□□□ 0.44
Cldn9Q9Z0S7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cldn9Q9Z0S7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
Cldn9Q9Z0S7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn9Q9Z0S7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn9Q9Z0S7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn9Q9Z0S7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn9Q9Z0S7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cldn9Q9Z0S7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.76■□□□□ 0.43
Cldn9Q9Z0S7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn9Q9Z0S7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn9Q9Z0S7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn9Q9Z0S7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Cldn9Q9Z0S7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
Cldn9Q9Z0S7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.76■□□□□ 0.43
Cldn9Q9Z0S7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.76■□□□□ 0.43
Cldn9Q9Z0S7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cldn9Q9Z0S7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Cldn9Q9Z0S7 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn9Q9Z0S7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn9Q9Z0S7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn9Q9Z0S7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn9Q9Z0S7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn9Q9Z0S7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn9Q9Z0S7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn9Q9Z0S7 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.75■□□□□ 0.43
Cldn9Q9Z0S7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn9Q9Z0S7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn9Q9Z0S7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn9Q9Z0S7 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn9Q9Z0S7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn9Q9Z0S7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Cldn9Q9Z0S7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.75■□□□□ 0.43
Cldn9Q9Z0S7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.75■□□□□ 0.43
Cldn9Q9Z0S7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn9Q9Z0S7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn9Q9Z0S7 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.75■□□□□ 0.43
Cldn9Q9Z0S7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Cldn9Q9Z0S7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn9Q9Z0S7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn9Q9Z0S7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cldn9Q9Z0S7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn9Q9Z0S7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Cldn9Q9Z0S7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn9Q9Z0S7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn9Q9Z0S7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn9Q9Z0S7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Cldn9Q9Z0S7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn9Q9Z0S7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.74■□□□□ 0.43
Cldn9Q9Z0S7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn9Q9Z0S7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn9Q9Z0S7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn9Q9Z0S7 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.74■□□□□ 0.43
Cldn9Q9Z0S7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cldn9Q9Z0S7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn9Q9Z0S7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cldn9Q9Z0S7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn9Q9Z0S7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn9Q9Z0S7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn9Q9Z0S7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn9Q9Z0S7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn9Q9Z0S7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.73■□□□□ 0.43
Cldn9Q9Z0S7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.73■□□□□ 0.43
Cldn9Q9Z0S7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn9Q9Z0S7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn9Q9Z0S7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn9Q9Z0S7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn9Q9Z0S7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn9Q9Z0S7 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.73■□□□□ 0.43
Cldn9Q9Z0S7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn9Q9Z0S7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.73■□□□□ 0.43
Cldn9Q9Z0S7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn9Q9Z0S7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cldn9Q9Z0S7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Cldn9Q9Z0S7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.72■□□□□ 0.43
Cldn9Q9Z0S7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Cldn9Q9Z0S7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn9Q9Z0S7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn9Q9Z0S7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn9Q9Z0S7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Cldn9Q9Z0S7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn9Q9Z0S7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn9Q9Z0S7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn9Q9Z0S7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn9Q9Z0S7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn9Q9Z0S7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cldn9Q9Z0S7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldn9Q9Z0S7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldn9Q9Z0S7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldn9Q9Z0S7 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.71■□□□□ 0.43
Cldn9Q9Z0S7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cldn9Q9Z0S7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cldn9Q9Z0S7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldn9Q9Z0S7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Cldn9Q9Z0S7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cldn9Q9Z0S7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn9Q9Z0S7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn9Q9Z0S7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn9Q9Z0S7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn9Q9Z0S7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms