Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cdh20Q9Z0M3 Gm42642-201ENSMUST00000200683 355 ntBASIC17.09■□□□□ 0.33
Cdh20Q9Z0M3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cdh20Q9Z0M3 Gm5874-201ENSMUST00000096101 508 ntBASIC17.09■□□□□ 0.33
Cdh20Q9Z0M3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh20Q9Z0M3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh20Q9Z0M3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh20Q9Z0M3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Cdh20Q9Z0M3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh20Q9Z0M3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh20Q9Z0M3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh20Q9Z0M3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
Cdh20Q9Z0M3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh20Q9Z0M3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh20Q9Z0M3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh20Q9Z0M3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh20Q9Z0M3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.08■□□□□ 0.32
Cdh20Q9Z0M3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh20Q9Z0M3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh20Q9Z0M3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh20Q9Z0M3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.08■□□□□ 0.32
Cdh20Q9Z0M3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
Cdh20Q9Z0M3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh20Q9Z0M3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh20Q9Z0M3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh20Q9Z0M3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh20Q9Z0M3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh20Q9Z0M3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh20Q9Z0M3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cdh20Q9Z0M3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh20Q9Z0M3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.07■□□□□ 0.32
Cdh20Q9Z0M3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh20Q9Z0M3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh20Q9Z0M3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cdh20Q9Z0M3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cdh20Q9Z0M3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh20Q9Z0M3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.07■□□□□ 0.32
Cdh20Q9Z0M3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh20Q9Z0M3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.07■□□□□ 0.32
Cdh20Q9Z0M3 Gm10033-202ENSMUST00000211874 928 ntBASIC17.07■□□□□ 0.32
Cdh20Q9Z0M3 Gm18671-201ENSMUST00000214826 683 ntBASIC17.07■□□□□ 0.32
Cdh20Q9Z0M3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh20Q9Z0M3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh20Q9Z0M3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Cdh20Q9Z0M3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh20Q9Z0M3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh20Q9Z0M3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh20Q9Z0M3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh20Q9Z0M3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cdh20Q9Z0M3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh20Q9Z0M3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh20Q9Z0M3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.05■□□□□ 0.32
Cdh20Q9Z0M3 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.05■□□□□ 0.32
Cdh20Q9Z0M3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cdh20Q9Z0M3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh20Q9Z0M3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh20Q9Z0M3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh20Q9Z0M3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh20Q9Z0M3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
Cdh20Q9Z0M3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh20Q9Z0M3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.05■□□□□ 0.32
Cdh20Q9Z0M3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh20Q9Z0M3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh20Q9Z0M3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh20Q9Z0M3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh20Q9Z0M3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cdh20Q9Z0M3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh20Q9Z0M3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.05■□□□□ 0.32
Cdh20Q9Z0M3 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.04■□□□□ 0.32
Cdh20Q9Z0M3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh20Q9Z0M3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh20Q9Z0M3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh20Q9Z0M3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh20Q9Z0M3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.04■□□□□ 0.32
Cdh20Q9Z0M3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh20Q9Z0M3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cdh20Q9Z0M3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh20Q9Z0M3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh20Q9Z0M3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh20Q9Z0M3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh20Q9Z0M3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cdh20Q9Z0M3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cdh20Q9Z0M3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cdh20Q9Z0M3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cdh20Q9Z0M3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh20Q9Z0M3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh20Q9Z0M3 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh20Q9Z0M3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh20Q9Z0M3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh20Q9Z0M3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.03■□□□□ 0.32
Cdh20Q9Z0M3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh20Q9Z0M3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.03■□□□□ 0.32
Cdh20Q9Z0M3 Gm7514-201ENSMUST00000209475 934 ntBASIC17.03■□□□□ 0.32
Cdh20Q9Z0M3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.03■□□□□ 0.32
Cdh20Q9Z0M3 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.03■□□□□ 0.32
Cdh20Q9Z0M3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh20Q9Z0M3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh20Q9Z0M3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cdh20Q9Z0M3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.03■□□□□ 0.32
Cdh20Q9Z0M3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms