Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn8aQ9WTU3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn8aQ9WTU3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn8aQ9WTU3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scn8aQ9WTU3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn8aQ9WTU3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn8aQ9WTU3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn8aQ9WTU3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn8aQ9WTU3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn8aQ9WTU3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Scn8aQ9WTU3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Scn8aQ9WTU3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scn8aQ9WTU3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scn8aQ9WTU3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scn8aQ9WTU3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Scn8aQ9WTU3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.66■□□□□ 0.58
Scn8aQ9WTU3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn8aQ9WTU3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn8aQ9WTU3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.66■□□□□ 0.58
Scn8aQ9WTU3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scn8aQ9WTU3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn8aQ9WTU3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scn8aQ9WTU3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.66■□□□□ 0.58
Scn8aQ9WTU3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn8aQ9WTU3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scn8aQ9WTU3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn8aQ9WTU3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn8aQ9WTU3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn8aQ9WTU3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn8aQ9WTU3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.65■□□□□ 0.58
Scn8aQ9WTU3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn8aQ9WTU3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scn8aQ9WTU3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.65■□□□□ 0.58
Scn8aQ9WTU3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scn8aQ9WTU3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.65■□□□□ 0.58
Scn8aQ9WTU3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scn8aQ9WTU3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Scn8aQ9WTU3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Scn8aQ9WTU3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Scn8aQ9WTU3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn8aQ9WTU3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn8aQ9WTU3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.64■□□□□ 0.57
Scn8aQ9WTU3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scn8aQ9WTU3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Scn8aQ9WTU3 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.63■□□□□ 0.57
Scn8aQ9WTU3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.63■□□□□ 0.57
Scn8aQ9WTU3 Gm10698-201ENSMUST00000182663 604 ntBASIC18.63■□□□□ 0.57
Scn8aQ9WTU3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn8aQ9WTU3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn8aQ9WTU3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn8aQ9WTU3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scn8aQ9WTU3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn8aQ9WTU3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scn8aQ9WTU3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Scn8aQ9WTU3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scn8aQ9WTU3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn8aQ9WTU3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Scn8aQ9WTU3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scn8aQ9WTU3 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.62■□□□□ 0.57
Scn8aQ9WTU3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Scn8aQ9WTU3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.62■□□□□ 0.57
Scn8aQ9WTU3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.62■□□□□ 0.57
Scn8aQ9WTU3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn8aQ9WTU3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn8aQ9WTU3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn8aQ9WTU3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn8aQ9WTU3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn8aQ9WTU3 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.61■□□□□ 0.57
Scn8aQ9WTU3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn8aQ9WTU3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn8aQ9WTU3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.61■□□□□ 0.57
Scn8aQ9WTU3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.61■□□□□ 0.57
Scn8aQ9WTU3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.61■□□□□ 0.57
Scn8aQ9WTU3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
Scn8aQ9WTU3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.61■□□□□ 0.57
Scn8aQ9WTU3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn8aQ9WTU3 Golph3-205ENSMUST00000228671 2842 ntBASIC18.61■□□□□ 0.57
Scn8aQ9WTU3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.61■□□□□ 0.57
Scn8aQ9WTU3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scn8aQ9WTU3 Gm8520-201ENSMUST00000186517 868 ntBASIC18.61■□□□□ 0.57
Scn8aQ9WTU3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.61■□□□□ 0.57
Scn8aQ9WTU3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn8aQ9WTU3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn8aQ9WTU3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn8aQ9WTU3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn8aQ9WTU3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.6■□□□□ 0.57
Scn8aQ9WTU3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn8aQ9WTU3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn8aQ9WTU3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn8aQ9WTU3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Scn8aQ9WTU3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn8aQ9WTU3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Scn8aQ9WTU3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.6■□□□□ 0.57
Scn8aQ9WTU3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn8aQ9WTU3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.6■□□□□ 0.57
Scn8aQ9WTU3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn8aQ9WTU3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn8aQ9WTU3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn8aQ9WTU3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.6■□□□□ 0.57
Scn8aQ9WTU3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms