Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tubd1Q9R1K7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubd1Q9R1K7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubd1Q9R1K7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tubd1Q9R1K7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Tubd1Q9R1K7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubd1Q9R1K7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Tubd1Q9R1K7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.84■□□□□ 0.61
Tubd1Q9R1K7 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubd1Q9R1K7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.84■□□□□ 0.61
Tubd1Q9R1K7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubd1Q9R1K7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubd1Q9R1K7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tubd1Q9R1K7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Tubd1Q9R1K7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Tubd1Q9R1K7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Tubd1Q9R1K7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.83■□□□□ 0.61
Tubd1Q9R1K7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tubd1Q9R1K7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubd1Q9R1K7 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tubd1Q9R1K7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Tubd1Q9R1K7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubd1Q9R1K7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubd1Q9R1K7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubd1Q9R1K7 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.83■□□□□ 0.6
Tubd1Q9R1K7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubd1Q9R1K7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubd1Q9R1K7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tubd1Q9R1K7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.82■□□□□ 0.6
Tubd1Q9R1K7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubd1Q9R1K7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubd1Q9R1K7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.82■□□□□ 0.6
Tubd1Q9R1K7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.82■□□□□ 0.6
Tubd1Q9R1K7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Tubd1Q9R1K7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tubd1Q9R1K7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Tubd1Q9R1K7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Tubd1Q9R1K7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Tubd1Q9R1K7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubd1Q9R1K7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubd1Q9R1K7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubd1Q9R1K7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubd1Q9R1K7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tubd1Q9R1K7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Tubd1Q9R1K7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Tubd1Q9R1K7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.81■□□□□ 0.6
Tubd1Q9R1K7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubd1Q9R1K7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubd1Q9R1K7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubd1Q9R1K7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Tubd1Q9R1K7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubd1Q9R1K7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubd1Q9R1K7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Tubd1Q9R1K7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubd1Q9R1K7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubd1Q9R1K7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubd1Q9R1K7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Tubd1Q9R1K7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubd1Q9R1K7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.8■□□□□ 0.6
Tubd1Q9R1K7 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.8■□□□□ 0.6
Tubd1Q9R1K7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.8■□□□□ 0.6
Tubd1Q9R1K7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tubd1Q9R1K7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.8■□□□□ 0.6
Tubd1Q9R1K7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubd1Q9R1K7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubd1Q9R1K7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Tubd1Q9R1K7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubd1Q9R1K7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubd1Q9R1K7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubd1Q9R1K7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubd1Q9R1K7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.79■□□□□ 0.6
Tubd1Q9R1K7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tubd1Q9R1K7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.79■□□□□ 0.6
Tubd1Q9R1K7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Tubd1Q9R1K7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Tubd1Q9R1K7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.79■□□□□ 0.6
Tubd1Q9R1K7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Tubd1Q9R1K7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubd1Q9R1K7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.78■□□□□ 0.6
Tubd1Q9R1K7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubd1Q9R1K7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Tubd1Q9R1K7 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.78■□□□□ 0.6
Tubd1Q9R1K7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubd1Q9R1K7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tubd1Q9R1K7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tubd1Q9R1K7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tubd1Q9R1K7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tubd1Q9R1K7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tubd1Q9R1K7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tubd1Q9R1K7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Tubd1Q9R1K7 Rab3c-203ENSMUST00000224180 967 ntBASIC18.77■□□□□ 0.6
Tubd1Q9R1K7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tubd1Q9R1K7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Tubd1Q9R1K7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tubd1Q9R1K7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.77■□□□□ 0.6
Tubd1Q9R1K7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tubd1Q9R1K7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Tubd1Q9R1K7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Tubd1Q9R1K7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tubd1Q9R1K7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms