Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Gm10033-202ENSMUST00000211874 928 ntBASIC18.85■□□□□ 0.61
Clcn2Q9R0A1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn2Q9R0A1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn2Q9R0A1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn2Q9R0A1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn2Q9R0A1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Clcn2Q9R0A1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Clcn2Q9R0A1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn2Q9R0A1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn2Q9R0A1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn2Q9R0A1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn2Q9R0A1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Clcn2Q9R0A1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn2Q9R0A1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn2Q9R0A1 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.84■□□□□ 0.61
Clcn2Q9R0A1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn2Q9R0A1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn2Q9R0A1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn2Q9R0A1 Gm42642-201ENSMUST00000200683 355 ntBASIC18.84■□□□□ 0.61
Clcn2Q9R0A1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn2Q9R0A1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn2Q9R0A1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn2Q9R0A1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn2Q9R0A1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.84■□□□□ 0.61
Clcn2Q9R0A1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clcn2Q9R0A1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Clcn2Q9R0A1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clcn2Q9R0A1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clcn2Q9R0A1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Clcn2Q9R0A1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.83■□□□□ 0.61
Clcn2Q9R0A1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clcn2Q9R0A1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clcn2Q9R0A1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn2Q9R0A1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.83■□□□□ 0.6
Clcn2Q9R0A1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.83■□□□□ 0.6
Clcn2Q9R0A1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Clcn2Q9R0A1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn2Q9R0A1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.83■□□□□ 0.6
Clcn2Q9R0A1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn2Q9R0A1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clcn2Q9R0A1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Clcn2Q9R0A1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Clcn2Q9R0A1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Clcn2Q9R0A1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Clcn2Q9R0A1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn2Q9R0A1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn2Q9R0A1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn2Q9R0A1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn2Q9R0A1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn2Q9R0A1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clcn2Q9R0A1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn2Q9R0A1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn2Q9R0A1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn2Q9R0A1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.81■□□□□ 0.6
Clcn2Q9R0A1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn2Q9R0A1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clcn2Q9R0A1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Clcn2Q9R0A1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.81■□□□□ 0.6
Clcn2Q9R0A1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
Clcn2Q9R0A1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.81■□□□□ 0.6
Clcn2Q9R0A1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn2Q9R0A1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn2Q9R0A1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn2Q9R0A1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn2Q9R0A1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn2Q9R0A1 Reep4-203ENSMUST00000226563 1444 ntBASIC18.8■□□□□ 0.6
Clcn2Q9R0A1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn2Q9R0A1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clcn2Q9R0A1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Clcn2Q9R0A1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn2Q9R0A1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn2Q9R0A1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn2Q9R0A1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn2Q9R0A1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Clcn2Q9R0A1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn2Q9R0A1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clcn2Q9R0A1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn2Q9R0A1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn2Q9R0A1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn2Q9R0A1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn2Q9R0A1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn2Q9R0A1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn2Q9R0A1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.78■□□□□ 0.6
Clcn2Q9R0A1 Gm9988-201ENSMUST00000069786 435 ntBASIC18.78■□□□□ 0.6
Clcn2Q9R0A1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn2Q9R0A1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn2Q9R0A1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn2Q9R0A1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Clcn2Q9R0A1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn2Q9R0A1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn2Q9R0A1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clcn2Q9R0A1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Clcn2Q9R0A1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.77■□□□□ 0.6
Clcn2Q9R0A1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Clcn2Q9R0A1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn2Q9R0A1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.77■□□□□ 0.6
Clcn2Q9R0A1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn2Q9R0A1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Clcn2Q9R0A1 Gm13234-201ENSMUST00000120010 747 ntBASIC18.77■□□□□ 0.6
Clcn2Q9R0A1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 191.8 ms